RNA–Protein interactions for RNA: ENST00000527667.5

C11orf49-213, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 530 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-213ENST00000527667 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
C11orf49-213ENST00000527667 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
C11orf49-213ENST00000527667 ABCC9O60706 1549 aa16.69■□□□□ 0.26
C11orf49-213ENST00000527667 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
C11orf49-213ENST00000527667 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
C11orf49-213ENST00000527667 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
C11orf49-213ENST00000527667 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
C11orf49-213ENST00000527667 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.06
C11orf49-213ENST00000527667 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
C11orf49-213ENST00000527667 NACADO15069 1562 aa15.33■□□□□ 0.05
C11orf49-213ENST00000527667 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
C11orf49-213ENST00000527667 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
C11orf49-213ENST00000527667 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
C11orf49-213ENST00000527667 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
C11orf49-213ENST00000527667 DNAJC5Q9H3Z4 198 aa15.05■□□□□ -0
C11orf49-213ENST00000527667 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
C11orf49-213ENST00000527667 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
C11orf49-213ENST00000527667 EIF4G1Q04637 1599 aaKnown RBP14.88□□□□□ -0.03
C11orf49-213ENST00000527667 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
C11orf49-213ENST00000527667 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
C11orf49-213ENST00000527667 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
C11orf49-213ENST00000527667 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
C11orf49-213ENST00000527667 CUX2O14529 1486 aa14.48□□□□□ -0.09
C11orf49-213ENST00000527667 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
C11orf49-213ENST00000527667 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
C11orf49-213ENST00000527667 NESP48681 1621 aa14.23□□□□□ -0.13
C11orf49-213ENST00000527667 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
C11orf49-213ENST00000527667 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
C11orf49-213ENST00000527667 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
C11orf49-213ENST00000527667 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
C11orf49-213ENST00000527667 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
C11orf49-213ENST00000527667 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
C11orf49-213ENST00000527667 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
C11orf49-213ENST00000527667 SMARCA4P51532 1647 aa14□□□□□ -0.17
C11orf49-213ENST00000527667 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
C11orf49-213ENST00000527667 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
C11orf49-213ENST00000527667 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
C11orf49-213ENST00000527667 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
C11orf49-213ENST00000527667 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
C11orf49-213ENST00000527667 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
C11orf49-213ENST00000527667 WDR62O43379 1518 aa13.8□□□□□ -0.2
C11orf49-213ENST00000527667 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
C11orf49-213ENST00000527667 WIZO95785 1651 aa13.8□□□□□ -0.2
C11orf49-213ENST00000527667 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
C11orf49-213ENST00000527667 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.21
C11orf49-213ENST00000527667 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
C11orf49-213ENST00000527667 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
C11orf49-213ENST00000527667 RIMBP3Q9UFD9 1639 aa13.75□□□□□ -0.21
C11orf49-213ENST00000527667 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
C11orf49-213ENST00000527667 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
C11orf49-213ENST00000527667 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
C11orf49-213ENST00000527667 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
C11orf49-213ENST00000527667 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
C11orf49-213ENST00000527667 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
C11orf49-213ENST00000527667 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
C11orf49-213ENST00000527667 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
C11orf49-213ENST00000527667 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
C11orf49-213ENST00000527667 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
C11orf49-213ENST00000527667 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
C11orf49-213ENST00000527667 CHD1O14646 1710 aa13.47□□□□□ -0.25
C11orf49-213ENST00000527667 CFTRP13569 1480 aa13.45□□□□□ -0.26
C11orf49-213ENST00000527667 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
C11orf49-213ENST00000527667 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
C11orf49-213ENST00000527667 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
C11orf49-213ENST00000527667 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
C11orf49-213ENST00000527667 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
C11orf49-213ENST00000527667 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
C11orf49-213ENST00000527667 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.29
C11orf49-213ENST00000527667 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
C11orf49-213ENST00000527667 FBLN2P98095 1184 aa13.23□□□□□ -0.29
C11orf49-213ENST00000527667 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
C11orf49-213ENST00000527667 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
C11orf49-213ENST00000527667 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
C11orf49-213ENST00000527667 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
C11orf49-213ENST00000527667 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
C11orf49-213ENST00000527667 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
C11orf49-213ENST00000527667 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
C11orf49-213ENST00000527667 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
C11orf49-213ENST00000527667 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
C11orf49-213ENST00000527667 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
C11orf49-213ENST00000527667 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
C11orf49-213ENST00000527667 CUX1P39880 1505 aa13.02□□□□□ -0.33
C11orf49-213ENST00000527667 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
C11orf49-213ENST00000527667 SOGA1O94964 1423 aa13.01□□□□□ -0.33
C11orf49-213ENST00000527667 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
C11orf49-213ENST00000527667 MAGI1Q96QZ7 1491 aaPredicted RBP13□□□□□ -0.33
C11orf49-213ENST00000527667 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
C11orf49-213ENST00000527667 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
C11orf49-213ENST00000527667 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
C11orf49-213ENST00000527667 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
C11orf49-213ENST00000527667 ADRA2BP18089 450 aa12.98□□□□□ -0.33
C11orf49-213ENST00000527667 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
C11orf49-213ENST00000527667 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
C11orf49-213ENST00000527667 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
C11orf49-213ENST00000527667 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
C11orf49-213ENST00000527667 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
C11orf49-213ENST00000527667 FOXD1Q16676 465 aa12.88□□□□□ -0.35
C11orf49-213ENST00000527667 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
C11orf49-213ENST00000527667 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
C11orf49-213ENST00000527667 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms