RNA–Protein interactions for RNA: ENST00000527365.1

ARHGEF4-214, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-214ENST00000527365 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
ARHGEF4-214ENST00000527365 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
ARHGEF4-214ENST00000527365 ABCC9O60706 1549 aa27.75■■■□□ 2.03
ARHGEF4-214ENST00000527365 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
ARHGEF4-214ENST00000527365 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
ARHGEF4-214ENST00000527365 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
ARHGEF4-214ENST00000527365 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
ARHGEF4-214ENST00000527365 NACADO15069 1562 aa27.09■■□□□ 1.93
ARHGEF4-214ENST00000527365 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
ARHGEF4-214ENST00000527365 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
ARHGEF4-214ENST00000527365 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
ARHGEF4-214ENST00000527365 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
ARHGEF4-214ENST00000527365 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
ARHGEF4-214ENST00000527365 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
ARHGEF4-214ENST00000527365 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
ARHGEF4-214ENST00000527365 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
ARHGEF4-214ENST00000527365 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
ARHGEF4-214ENST00000527365 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
ARHGEF4-214ENST00000527365 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
ARHGEF4-214ENST00000527365 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
ARHGEF4-214ENST00000527365 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
ARHGEF4-214ENST00000527365 WIZO95785 1651 aa25.24■■□□□ 1.63
ARHGEF4-214ENST00000527365 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
ARHGEF4-214ENST00000527365 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
ARHGEF4-214ENST00000527365 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
ARHGEF4-214ENST00000527365 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
ARHGEF4-214ENST00000527365 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
ARHGEF4-214ENST00000527365 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
ARHGEF4-214ENST00000527365 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
ARHGEF4-214ENST00000527365 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
ARHGEF4-214ENST00000527365 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
ARHGEF4-214ENST00000527365 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
ARHGEF4-214ENST00000527365 CFTRP13569 1480 aa24.31■■□□□ 1.48
ARHGEF4-214ENST00000527365 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
ARHGEF4-214ENST00000527365 LAMC3Q9Y6N6 1575 aa24.23■■□□□ 1.47
ARHGEF4-214ENST00000527365 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
ARHGEF4-214ENST00000527365 NESP48681 1621 aa24.22■■□□□ 1.47
ARHGEF4-214ENST00000527365 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
ARHGEF4-214ENST00000527365 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
ARHGEF4-214ENST00000527365 PDS5BQ9NTI5 1447 aa24.02■■□□□ 1.44
ARHGEF4-214ENST00000527365 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
ARHGEF4-214ENST00000527365 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
ARHGEF4-214ENST00000527365 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
ARHGEF4-214ENST00000527365 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
ARHGEF4-214ENST00000527365 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
ARHGEF4-214ENST00000527365 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
ARHGEF4-214ENST00000527365 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
ARHGEF4-214ENST00000527365 CUX1P39880 1505 aa23.84■■□□□ 1.41
ARHGEF4-214ENST00000527365 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
ARHGEF4-214ENST00000527365 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
ARHGEF4-214ENST00000527365 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
ARHGEF4-214ENST00000527365 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
ARHGEF4-214ENST00000527365 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
ARHGEF4-214ENST00000527365 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
ARHGEF4-214ENST00000527365 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
ARHGEF4-214ENST00000527365 WDR62O43379 1518 aa23.66■■□□□ 1.38
ARHGEF4-214ENST00000527365 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
ARHGEF4-214ENST00000527365 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
ARHGEF4-214ENST00000527365 SOGA1O94964 1423 aa23.5■■□□□ 1.35
ARHGEF4-214ENST00000527365 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
ARHGEF4-214ENST00000527365 CUX2O14529 1486 aa23.47■■□□□ 1.35
ARHGEF4-214ENST00000527365 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
ARHGEF4-214ENST00000527365 WDR97A6NE52 1622 aa23.43■■□□□ 1.34
ARHGEF4-214ENST00000527365 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
ARHGEF4-214ENST00000527365 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
ARHGEF4-214ENST00000527365 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
ARHGEF4-214ENST00000527365 FAM9AQ8IZU1 332 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF4-214ENST00000527365 EEA1Q15075 1411 aa23.37■■□□□ 1.33
ARHGEF4-214ENST00000527365 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
ARHGEF4-214ENST00000527365 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
ARHGEF4-214ENST00000527365 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
ARHGEF4-214ENST00000527365 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
ARHGEF4-214ENST00000527365 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
ARHGEF4-214ENST00000527365 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
ARHGEF4-214ENST00000527365 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
ARHGEF4-214ENST00000527365 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
ARHGEF4-214ENST00000527365 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
ARHGEF4-214ENST00000527365 IGF1RP08069 1367 aa23.17■■□□□ 1.3
ARHGEF4-214ENST00000527365 ERICH3Q5RHP9 1530 aa23.16■■□□□ 1.3
ARHGEF4-214ENST00000527365 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
ARHGEF4-214ENST00000527365 KIF21BO75037 1637 aa23.12■■□□□ 1.29
ARHGEF4-214ENST00000527365 CUL7Q14999 1698 aa23.1■■□□□ 1.29
ARHGEF4-214ENST00000527365 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
ARHGEF4-214ENST00000527365 CARMIL1Q5VZK9 1371 aa23.06■■□□□ 1.28
ARHGEF4-214ENST00000527365 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
ARHGEF4-214ENST00000527365 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
ARHGEF4-214ENST00000527365 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
ARHGEF4-214ENST00000527365 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
ARHGEF4-214ENST00000527365 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
ARHGEF4-214ENST00000527365 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
ARHGEF4-214ENST00000527365 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
ARHGEF4-214ENST00000527365 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
ARHGEF4-214ENST00000527365 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
ARHGEF4-214ENST00000527365 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
ARHGEF4-214ENST00000527365 TNIKQ9UKE5 1360 aa22.86■■□□□ 1.25
ARHGEF4-214ENST00000527365 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
ARHGEF4-214ENST00000527365 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF4-214ENST00000527365 CHD1O14646 1710 aa22.8■■□□□ 1.24
ARHGEF4-214ENST00000527365 FBLN2P98095 1184 aa22.8■■□□□ 1.24
ARHGEF4-214ENST00000527365 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms