RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
C11orf54-205ENST00000527363 ABCC9O60706 1549 aa25.82■■□□□ 1.72
C11orf54-205ENST00000527363 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
C11orf54-205ENST00000527363 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
C11orf54-205ENST00000527363 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
C11orf54-205ENST00000527363 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
C11orf54-205ENST00000527363 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
C11orf54-205ENST00000527363 NACADO15069 1562 aa23.8■■□□□ 1.4
C11orf54-205ENST00000527363 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
C11orf54-205ENST00000527363 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
C11orf54-205ENST00000527363 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
C11orf54-205ENST00000527363 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
C11orf54-205ENST00000527363 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
C11orf54-205ENST00000527363 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
C11orf54-205ENST00000527363 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
C11orf54-205ENST00000527363 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
C11orf54-205ENST00000527363 CUX2O14529 1486 aa22.83■■□□□ 1.25
C11orf54-205ENST00000527363 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
C11orf54-205ENST00000527363 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
C11orf54-205ENST00000527363 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
C11orf54-205ENST00000527363 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
C11orf54-205ENST00000527363 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
C11orf54-205ENST00000527363 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
C11orf54-205ENST00000527363 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
C11orf54-205ENST00000527363 NESP48681 1621 aa21.84■■□□□ 1.09
C11orf54-205ENST00000527363 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.09
C11orf54-205ENST00000527363 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
C11orf54-205ENST00000527363 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
C11orf54-205ENST00000527363 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
C11orf54-205ENST00000527363 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
C11orf54-205ENST00000527363 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
C11orf54-205ENST00000527363 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
C11orf54-205ENST00000527363 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
C11orf54-205ENST00000527363 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
C11orf54-205ENST00000527363 KIF21AQ7Z4S6 1674 aa21.42■■□□□ 1.02
C11orf54-205ENST00000527363 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
C11orf54-205ENST00000527363 WDR62O43379 1518 aa21.39■■□□□ 1.01
C11orf54-205ENST00000527363 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
C11orf54-205ENST00000527363 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
C11orf54-205ENST00000527363 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
C11orf54-205ENST00000527363 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
C11orf54-205ENST00000527363 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
C11orf54-205ENST00000527363 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
C11orf54-205ENST00000527363 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
C11orf54-205ENST00000527363 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
C11orf54-205ENST00000527363 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
C11orf54-205ENST00000527363 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
C11orf54-205ENST00000527363 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
C11orf54-205ENST00000527363 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
C11orf54-205ENST00000527363 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
C11orf54-205ENST00000527363 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
C11orf54-205ENST00000527363 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.93
C11orf54-205ENST00000527363 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
C11orf54-205ENST00000527363 CFTRP13569 1480 aa20.82■□□□□ 0.92
C11orf54-205ENST00000527363 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
C11orf54-205ENST00000527363 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
C11orf54-205ENST00000527363 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
C11orf54-205ENST00000527363 FBLN2P98095 1184 aa20.56■□□□□ 0.88
C11orf54-205ENST00000527363 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
C11orf54-205ENST00000527363 CHD1O14646 1710 aa20.48■□□□□ 0.87
C11orf54-205ENST00000527363 WIZO95785 1651 aa20.48■□□□□ 0.87
C11orf54-205ENST00000527363 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
C11orf54-205ENST00000527363 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
C11orf54-205ENST00000527363 TOPBP1Q92547 1522 aa20.45■□□□□ 0.86
C11orf54-205ENST00000527363 CLASP1Q7Z460 1538 aa20.38■□□□□ 0.85
C11orf54-205ENST00000527363 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
C11orf54-205ENST00000527363 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
C11orf54-205ENST00000527363 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
C11orf54-205ENST00000527363 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
C11orf54-205ENST00000527363 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
C11orf54-205ENST00000527363 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
C11orf54-205ENST00000527363 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
C11orf54-205ENST00000527363 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
C11orf54-205ENST00000527363 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
C11orf54-205ENST00000527363 KDM4FA0A1W2PPD8 638 aa20.19■□□□□ 0.82
C11orf54-205ENST00000527363 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
C11orf54-205ENST00000527363 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
C11orf54-205ENST00000527363 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
C11orf54-205ENST00000527363 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
C11orf54-205ENST00000527363 SOGA1O94964 1423 aa20.12■□□□□ 0.81
C11orf54-205ENST00000527363 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
C11orf54-205ENST00000527363 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
C11orf54-205ENST00000527363 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
C11orf54-205ENST00000527363 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
C11orf54-205ENST00000527363 KIF13AQ9H1H9 1805 aa19.93■□□□□ 0.78
C11orf54-205ENST00000527363 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
C11orf54-205ENST00000527363 FBXO41Q8TF61 875 aa19.9■□□□□ 0.78
C11orf54-205ENST00000527363 ERCC6L2Q5T890 1561 aa19.89■□□□□ 0.77
C11orf54-205ENST00000527363 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
C11orf54-205ENST00000527363 KDM6BO15054 1643 aa19.84■□□□□ 0.77
C11orf54-205ENST00000527363 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
C11orf54-205ENST00000527363 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
C11orf54-205ENST00000527363 NUP160Q12769 1436 aa19.79■□□□□ 0.76
C11orf54-205ENST00000527363 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
C11orf54-205ENST00000527363 MAPKBP1O60336 1514 aa19.77■□□□□ 0.76
C11orf54-205ENST00000527363 HECW2Q9P2P5 1572 aa19.75■□□□□ 0.75
C11orf54-205ENST00000527363 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
C11orf54-205ENST00000527363 DIP2BQ9P265 1576 aa19.73■□□□□ 0.75
C11orf54-205ENST00000527363 ADGRL1O94910 1474 aa19.73■□□□□ 0.75
C11orf54-205ENST00000527363 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms