RNA–Protein interactions for RNA: ENST00000527308.5

PDZD3-207, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-207ENST00000527308 NISCHQ9Y2I1 1504 aa25.91■■□□□ 1.74
PDZD3-207ENST00000527308 ABCC9O60706 1549 aa23.66■■□□□ 1.38
PDZD3-207ENST00000527308 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
PDZD3-207ENST00000527308 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
PDZD3-207ENST00000527308 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
PDZD3-207ENST00000527308 NACADO15069 1562 aa22.23■■□□□ 1.15
PDZD3-207ENST00000527308 UNC13AQ9UPW8 1703 aa21.95■■□□□ 1.1
PDZD3-207ENST00000527308 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
PDZD3-207ENST00000527308 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
PDZD3-207ENST00000527308 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
PDZD3-207ENST00000527308 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
PDZD3-207ENST00000527308 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
PDZD3-207ENST00000527308 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
PDZD3-207ENST00000527308 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
PDZD3-207ENST00000527308 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
PDZD3-207ENST00000527308 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
PDZD3-207ENST00000527308 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
PDZD3-207ENST00000527308 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
PDZD3-207ENST00000527308 DNAJC5Q9H3Z4 198 aa20.94■□□□□ 0.94
PDZD3-207ENST00000527308 CUX2O14529 1486 aa20.6■□□□□ 0.89
PDZD3-207ENST00000527308 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
PDZD3-207ENST00000527308 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
PDZD3-207ENST00000527308 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
PDZD3-207ENST00000527308 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
PDZD3-207ENST00000527308 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
PDZD3-207ENST00000527308 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
PDZD3-207ENST00000527308 NESP48681 1621 aa20.23■□□□□ 0.83
PDZD3-207ENST00000527308 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
PDZD3-207ENST00000527308 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
PDZD3-207ENST00000527308 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
PDZD3-207ENST00000527308 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
PDZD3-207ENST00000527308 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
PDZD3-207ENST00000527308 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
PDZD3-207ENST00000527308 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
PDZD3-207ENST00000527308 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
PDZD3-207ENST00000527308 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
PDZD3-207ENST00000527308 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
PDZD3-207ENST00000527308 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
PDZD3-207ENST00000527308 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
PDZD3-207ENST00000527308 WDR62O43379 1518 aa19.8■□□□□ 0.76
PDZD3-207ENST00000527308 WIZO95785 1651 aa19.68■□□□□ 0.74
PDZD3-207ENST00000527308 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
PDZD3-207ENST00000527308 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
PDZD3-207ENST00000527308 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
PDZD3-207ENST00000527308 CFTRP13569 1480 aa19.57■□□□□ 0.72
PDZD3-207ENST00000527308 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
PDZD3-207ENST00000527308 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
PDZD3-207ENST00000527308 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
PDZD3-207ENST00000527308 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
PDZD3-207ENST00000527308 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
PDZD3-207ENST00000527308 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
PDZD3-207ENST00000527308 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
PDZD3-207ENST00000527308 IFT140Q96RY7 1462 aa19.3■□□□□ 0.68
PDZD3-207ENST00000527308 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
PDZD3-207ENST00000527308 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
PDZD3-207ENST00000527308 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
PDZD3-207ENST00000527308 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
PDZD3-207ENST00000527308 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
PDZD3-207ENST00000527308 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
PDZD3-207ENST00000527308 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
PDZD3-207ENST00000527308 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
PDZD3-207ENST00000527308 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
PDZD3-207ENST00000527308 CHD1O14646 1710 aa19.1■□□□□ 0.65
PDZD3-207ENST00000527308 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
PDZD3-207ENST00000527308 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
PDZD3-207ENST00000527308 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
PDZD3-207ENST00000527308 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
PDZD3-207ENST00000527308 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
PDZD3-207ENST00000527308 FBLN2P98095 1184 aa18.96■□□□□ 0.63
PDZD3-207ENST00000527308 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
PDZD3-207ENST00000527308 SOGA1O94964 1423 aa18.9■□□□□ 0.62
PDZD3-207ENST00000527308 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
PDZD3-207ENST00000527308 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
PDZD3-207ENST00000527308 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
PDZD3-207ENST00000527308 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
PDZD3-207ENST00000527308 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
PDZD3-207ENST00000527308 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
PDZD3-207ENST00000527308 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
PDZD3-207ENST00000527308 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
PDZD3-207ENST00000527308 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
PDZD3-207ENST00000527308 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
PDZD3-207ENST00000527308 CUX1P39880 1505 aa18.74■□□□□ 0.59
PDZD3-207ENST00000527308 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
PDZD3-207ENST00000527308 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
PDZD3-207ENST00000527308 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
PDZD3-207ENST00000527308 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
PDZD3-207ENST00000527308 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
PDZD3-207ENST00000527308 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
PDZD3-207ENST00000527308 NUP160Q12769 1436 aa18.49■□□□□ 0.55
PDZD3-207ENST00000527308 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
PDZD3-207ENST00000527308 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
PDZD3-207ENST00000527308 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
PDZD3-207ENST00000527308 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
PDZD3-207ENST00000527308 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
PDZD3-207ENST00000527308 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
PDZD3-207ENST00000527308 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
PDZD3-207ENST00000527308 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
PDZD3-207ENST00000527308 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
PDZD3-207ENST00000527308 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
PDZD3-207ENST00000527308 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms