RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 NISCHQ9Y2I1 1504 aa47.54■■■■■ 5.2
TTC39A-215ENST00000527205 CCDC180Q9P1Z9 1646 aa42.34■■■■■ 4.37
TTC39A-215ENST00000527205 ABCC9O60706 1549 aa41.37■■■■■ 4.21
TTC39A-215ENST00000527205 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
TTC39A-215ENST00000527205 NACADO15069 1562 aa39.7■■■■□ 3.95
TTC39A-215ENST00000527205 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
TTC39A-215ENST00000527205 DCAF8L2P0C7V8 631 aa39.56■■■■□ 3.92
TTC39A-215ENST00000527205 MYO15BQ96JP2 1530 aa39.42■■■■□ 3.9
TTC39A-215ENST00000527205 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
TTC39A-215ENST00000527205 UNC13AQ9UPW8 1703 aa39.13■■■■□ 3.85
TTC39A-215ENST00000527205 BICRAQ9NZM4 1560 aa38.68■■■■□ 3.78
TTC39A-215ENST00000527205 SCRIBQ14160 1630 aa38.66■■■■□ 3.78
TTC39A-215ENST00000527205 PABPN1Q86U42 306 aaKnown RBP eCLIP38.59■■■■□ 3.77
TTC39A-215ENST00000527205 SHROOM4Q9ULL8 1493 aa38.08■■■■□ 3.69
TTC39A-215ENST00000527205 DNAJC5BQ9UF47 199 aa37.95■■■■□ 3.67
TTC39A-215ENST00000527205 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
TTC39A-215ENST00000527205 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
TTC39A-215ENST00000527205 CECR2Q9BXF3 1484 aa37.12■■■■□ 3.53
TTC39A-215ENST00000527205 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
TTC39A-215ENST00000527205 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
TTC39A-215ENST00000527205 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.46
TTC39A-215ENST00000527205 ATAD2BQ9ULI0 1458 aa36.67■■■■□ 3.46
TTC39A-215ENST00000527205 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
TTC39A-215ENST00000527205 NCAPD3P42695 1498 aa36.59■■■■□ 3.45
TTC39A-215ENST00000527205 PEG3Q9GZU2 1588 aa36.55■■■■□ 3.44
TTC39A-215ENST00000527205 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
TTC39A-215ENST00000527205 WIZO95785 1651 aa36.37■■■■□ 3.41
TTC39A-215ENST00000527205 BAZ1BQ9UIG0 1483 aaKnown RBP36.36■■■■□ 3.41
TTC39A-215ENST00000527205 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
TTC39A-215ENST00000527205 TOP2AP11388 1531 aaKnown RBP35.89■■■■□ 3.34
TTC39A-215ENST00000527205 NESP48681 1621 aa35.85■■■■□ 3.33
TTC39A-215ENST00000527205 LAMC3Q9Y6N6 1575 aa35.69■■■■□ 3.3
TTC39A-215ENST00000527205 ERCC6Q03468 1493 aa35.57■■■■□ 3.28
TTC39A-215ENST00000527205 KIF21AQ7Z4S6 1674 aa35.53■■■■□ 3.28
TTC39A-215ENST00000527205 CADPSQ9ULU8 1353 aa35.51■■■■□ 3.27
TTC39A-215ENST00000527205 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
TTC39A-215ENST00000527205 THOC2Q8NI27 1593 aaKnown RBP35.36■■■■□ 3.25
TTC39A-215ENST00000527205 CFTRP13569 1480 aa35.35■■■■□ 3.25
TTC39A-215ENST00000527205 PDS5BQ9NTI5 1447 aa35.33■■■■□ 3.25
TTC39A-215ENST00000527205 PRDM2Q13029 1718 aa35.31■■■■□ 3.24
TTC39A-215ENST00000527205 SUPT5HO00267 1087 aaKnown RBP35.22■■■■□ 3.23
TTC39A-215ENST00000527205 CUX2O14529 1486 aa35.2■■■■□ 3.23
TTC39A-215ENST00000527205 FANCD2Q9BXW9 1451 aa35.16■■■■□ 3.22
TTC39A-215ENST00000527205 CEP164Q9UPV0 1460 aa35.11■■■■□ 3.21
TTC39A-215ENST00000527205 MRC2Q9UBG0 1479 aa35.07■■■■□ 3.2
TTC39A-215ENST00000527205 WDR62O43379 1518 aa35.01■■■■□ 3.19
TTC39A-215ENST00000527205 URB2Q14146 1524 aaKnown RBP34.88■■■■□ 3.17
TTC39A-215ENST00000527205 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
TTC39A-215ENST00000527205 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
TTC39A-215ENST00000527205 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
TTC39A-215ENST00000527205 CUX1P39880 1505 aa34.42■■■■□ 3.1
TTC39A-215ENST00000527205 IFT140Q96RY7 1462 aa34.35■■■■□ 3.09
TTC39A-215ENST00000527205 POLA1P09884 1462 aaPredicted RBP34.34■■■■□ 3.09
TTC39A-215ENST00000527205 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
TTC39A-215ENST00000527205 ZNF608Q9ULD9 1512 aaPredicted RBP34.3■■■■□ 3.08
TTC39A-215ENST00000527205 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
TTC39A-215ENST00000527205 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
TTC39A-215ENST00000527205 EIF4G3O43432 1585 aaKnown RBP34.21■■■■□ 3.07
TTC39A-215ENST00000527205 SYNJ1O43426 1573 aa34.17■■■■□ 3.06
TTC39A-215ENST00000527205 BIVM-ERCC5R4GMW8 1640 aa34.17■■■■□ 3.06
TTC39A-215ENST00000527205 WDR97A6NE52 1622 aa34.14■■■■□ 3.06
TTC39A-215ENST00000527205 SOGA1O94964 1423 aa34.12■■■■□ 3.05
TTC39A-215ENST00000527205 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
TTC39A-215ENST00000527205 WRNQ14191 1432 aaPredicted RBP eCLIP34.1■■■■□ 3.05
TTC39A-215ENST00000527205 AQRO60306 1485 aaKnown RBP eCLIP34.05■■■■□ 3.04
TTC39A-215ENST00000527205 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
TTC39A-215ENST00000527205 TDRD9Q8NDG6 1382 aaKnown RBP33.95■■■■□ 3.02
TTC39A-215ENST00000527205 ABCA10Q8WWZ4 1543 aa33.9■■■■□ 3.02
TTC39A-215ENST00000527205 PBRM1Q86U86 1689 aa33.88■■■■□ 3.01
TTC39A-215ENST00000527205 ABCA5Q8WWZ7 1642 aa33.87■■■■□ 3.01
TTC39A-215ENST00000527205 CHD1O14646 1710 aa33.84■■■■□ 3.01
TTC39A-215ENST00000527205 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
TTC39A-215ENST00000527205 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
TTC39A-215ENST00000527205 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
TTC39A-215ENST00000527205 MAGI1Q96QZ7 1491 aaPredicted RBP33.65■■■□□ 2.98
TTC39A-215ENST00000527205 OSCARQ8IYS5 282 aa33.63■■■□□ 2.97
TTC39A-215ENST00000527205 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
TTC39A-215ENST00000527205 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
TTC39A-215ENST00000527205 FBLN2P98095 1184 aa33.53■■■□□ 2.96
TTC39A-215ENST00000527205 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
TTC39A-215ENST00000527205 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
TTC39A-215ENST00000527205 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
TTC39A-215ENST00000527205 GRIN2AQ12879 1464 aa33.35■■■□□ 2.93
TTC39A-215ENST00000527205 RIMBP3CA6NJZ7 1639 aa33.35■■■□□ 2.93
TTC39A-215ENST00000527205 RIMBP3BA6NNM3 1639 aa33.35■■■□□ 2.93
TTC39A-215ENST00000527205 RIMBP3Q9UFD9 1639 aa33.35■■■□□ 2.93
TTC39A-215ENST00000527205 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
TTC39A-215ENST00000527205 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
TTC39A-215ENST00000527205 CEP170Q5SW79 1584 aa33.27■■■□□ 2.92
TTC39A-215ENST00000527205 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
TTC39A-215ENST00000527205 CUL7Q14999 1698 aa33.25■■■□□ 2.91
TTC39A-215ENST00000527205 IGF1RP08069 1367 aa33.22■■■□□ 2.91
TTC39A-215ENST00000527205 RUSC2Q8N2Y8 1516 aa33.22■■■□□ 2.91
TTC39A-215ENST00000527205 NUP160Q12769 1436 aa33.19■■■□□ 2.9
TTC39A-215ENST00000527205 TRIM41Q8WV44 630 aa33.19■■■□□ 2.9
TTC39A-215ENST00000527205 SHROOM2Q13796 1616 aa33.03■■■□□ 2.88
TTC39A-215ENST00000527205 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
TTC39A-215ENST00000527205 CARMIL1Q5VZK9 1371 aa33.02■■■□□ 2.88
TTC39A-215ENST00000527205 ERCC6L2Q5T890 1561 aa32.99■■■□□ 2.87
TTC39A-215ENST00000527205 CHIC1Q5VXU3 224 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms