RNA–Protein interactions for RNA: ENST00000526886.5

SAMD3-208, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 2

Gene SAMD3, Length 454 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-208ENST00000526886 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
SAMD3-208ENST00000526886 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
SAMD3-208ENST00000526886 ABCC9O60706 1549 aa18.4■□□□□ 0.54
SAMD3-208ENST00000526886 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
SAMD3-208ENST00000526886 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SAMD3-208ENST00000526886 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
SAMD3-208ENST00000526886 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
SAMD3-208ENST00000526886 NACADO15069 1562 aa18.04■□□□□ 0.48
SAMD3-208ENST00000526886 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
SAMD3-208ENST00000526886 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
SAMD3-208ENST00000526886 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
SAMD3-208ENST00000526886 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
SAMD3-208ENST00000526886 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
SAMD3-208ENST00000526886 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
SAMD3-208ENST00000526886 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
SAMD3-208ENST00000526886 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
SAMD3-208ENST00000526886 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
SAMD3-208ENST00000526886 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
SAMD3-208ENST00000526886 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
SAMD3-208ENST00000526886 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
SAMD3-208ENST00000526886 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
SAMD3-208ENST00000526886 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
SAMD3-208ENST00000526886 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
SAMD3-208ENST00000526886 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
SAMD3-208ENST00000526886 WIZO95785 1651 aa16.72■□□□□ 0.27
SAMD3-208ENST00000526886 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
SAMD3-208ENST00000526886 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
SAMD3-208ENST00000526886 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
SAMD3-208ENST00000526886 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
SAMD3-208ENST00000526886 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
SAMD3-208ENST00000526886 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
SAMD3-208ENST00000526886 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SAMD3-208ENST00000526886 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
SAMD3-208ENST00000526886 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
SAMD3-208ENST00000526886 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
SAMD3-208ENST00000526886 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
SAMD3-208ENST00000526886 CFTRP13569 1480 aa16.13■□□□□ 0.17
SAMD3-208ENST00000526886 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
SAMD3-208ENST00000526886 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
SAMD3-208ENST00000526886 NESP48681 1621 aa16.01■□□□□ 0.15
SAMD3-208ENST00000526886 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
SAMD3-208ENST00000526886 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
SAMD3-208ENST00000526886 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
SAMD3-208ENST00000526886 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
SAMD3-208ENST00000526886 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
SAMD3-208ENST00000526886 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
SAMD3-208ENST00000526886 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
SAMD3-208ENST00000526886 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
SAMD3-208ENST00000526886 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
SAMD3-208ENST00000526886 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
SAMD3-208ENST00000526886 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
SAMD3-208ENST00000526886 MRC2Q9UBG0 1479 aa15.82■□□□□ 0.12
SAMD3-208ENST00000526886 CUX1P39880 1505 aa15.8■□□□□ 0.12
SAMD3-208ENST00000526886 TOPBP1Q92547 1522 aa15.77■□□□□ 0.11
SAMD3-208ENST00000526886 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
SAMD3-208ENST00000526886 WDR62O43379 1518 aa15.74■□□□□ 0.11
SAMD3-208ENST00000526886 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
SAMD3-208ENST00000526886 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
SAMD3-208ENST00000526886 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
SAMD3-208ENST00000526886 EEA1Q15075 1411 aa15.61■□□□□ 0.09
SAMD3-208ENST00000526886 SOGA1O94964 1423 aa15.59■□□□□ 0.09
SAMD3-208ENST00000526886 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
SAMD3-208ENST00000526886 WDR97A6NE52 1622 aa15.58■□□□□ 0.09
SAMD3-208ENST00000526886 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.08
SAMD3-208ENST00000526886 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
SAMD3-208ENST00000526886 CUX2O14529 1486 aa15.56■□□□□ 0.08
SAMD3-208ENST00000526886 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
SAMD3-208ENST00000526886 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
SAMD3-208ENST00000526886 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
SAMD3-208ENST00000526886 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
SAMD3-208ENST00000526886 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
SAMD3-208ENST00000526886 PBRM1Q86U86 1689 aa15.45■□□□□ 0.06
SAMD3-208ENST00000526886 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
SAMD3-208ENST00000526886 CUL7Q14999 1698 aa15.44■□□□□ 0.06
SAMD3-208ENST00000526886 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
SAMD3-208ENST00000526886 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
SAMD3-208ENST00000526886 TDRD9Q8NDG6 1382 aaKnown RBP15.41■□□□□ 0.06
SAMD3-208ENST00000526886 KIF21BO75037 1637 aa15.4■□□□□ 0.06
SAMD3-208ENST00000526886 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
SAMD3-208ENST00000526886 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
SAMD3-208ENST00000526886 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
SAMD3-208ENST00000526886 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
SAMD3-208ENST00000526886 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
SAMD3-208ENST00000526886 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
SAMD3-208ENST00000526886 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.05
SAMD3-208ENST00000526886 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
SAMD3-208ENST00000526886 IGF1RP08069 1367 aa15.31■□□□□ 0.04
SAMD3-208ENST00000526886 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
SAMD3-208ENST00000526886 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
SAMD3-208ENST00000526886 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
SAMD3-208ENST00000526886 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
SAMD3-208ENST00000526886 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
SAMD3-208ENST00000526886 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
SAMD3-208ENST00000526886 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
SAMD3-208ENST00000526886 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
SAMD3-208ENST00000526886 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
SAMD3-208ENST00000526886 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
SAMD3-208ENST00000526886 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
SAMD3-208ENST00000526886 CHD1O14646 1710 aa15.17■□□□□ 0.02
SAMD3-208ENST00000526886 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms