RNA–Protein interactions for RNA: ENST00000526599.1

CHRNA10-203, Transcript of cholinergic receptor nicotinic alpha 10 subunit, humanhuman

TSL 1 (best)

Gene CHRNA10, Length 1,541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA10-203ENST00000526599 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
CHRNA10-203ENST00000526599 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
CHRNA10-203ENST00000526599 ABCC9O60706 1549 aa39.9■■■■□ 3.98
CHRNA10-203ENST00000526599 DCAF8L2P0C7V8 631 aa38.4■■■■□ 3.74
CHRNA10-203ENST00000526599 RB1CC1Q8TDY2 1594 aa38.34■■■■□ 3.73
CHRNA10-203ENST00000526599 NACADO15069 1562 aa38.3■■■■□ 3.72
CHRNA10-203ENST00000526599 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
CHRNA10-203ENST00000526599 MYO15BQ96JP2 1530 aa38.05■■■■□ 3.68
CHRNA10-203ENST00000526599 DCAF1Q9Y4B6 1507 aa37.91■■■■□ 3.66
CHRNA10-203ENST00000526599 UNC13AQ9UPW8 1703 aa37.52■■■■□ 3.6
CHRNA10-203ENST00000526599 PABPN1Q86U42 306 aaKnown RBP eCLIP37.33■■■■□ 3.57
CHRNA10-203ENST00000526599 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
CHRNA10-203ENST00000526599 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
CHRNA10-203ENST00000526599 SHROOM4Q9ULL8 1493 aa36.74■■■■□ 3.47
CHRNA10-203ENST00000526599 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
CHRNA10-203ENST00000526599 EIF4G1Q04637 1599 aaKnown RBP36.22■■■■□ 3.39
CHRNA10-203ENST00000526599 CC2D2AQ9P2K1 1620 aa36.08■■■■□ 3.37
CHRNA10-203ENST00000526599 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
CHRNA10-203ENST00000526599 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
CHRNA10-203ENST00000526599 BAZ1AQ9NRL2 1556 aaPredicted RBP35.53■■■■□ 3.28
CHRNA10-203ENST00000526599 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
CHRNA10-203ENST00000526599 MROH2BQ7Z745 1585 aa35.38■■■■□ 3.25
CHRNA10-203ENST00000526599 NCAPD3P42695 1498 aa35.35■■■■□ 3.25
CHRNA10-203ENST00000526599 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
CHRNA10-203ENST00000526599 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
CHRNA10-203ENST00000526599 HMGXB3Q12766 1538 aa35.17■■■■□ 3.22
CHRNA10-203ENST00000526599 BAZ1BQ9UIG0 1483 aaKnown RBP35.09■■■■□ 3.21
CHRNA10-203ENST00000526599 WIZO95785 1651 aa35.01■■■■□ 3.19
CHRNA10-203ENST00000526599 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
CHRNA10-203ENST00000526599 TOP2AP11388 1531 aaKnown RBP34.59■■■■□ 3.13
CHRNA10-203ENST00000526599 NESP48681 1621 aa34.55■■■■□ 3.12
CHRNA10-203ENST00000526599 LAMC3Q9Y6N6 1575 aa34.41■■■■□ 3.1
CHRNA10-203ENST00000526599 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
CHRNA10-203ENST00000526599 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
CHRNA10-203ENST00000526599 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
CHRNA10-203ENST00000526599 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
CHRNA10-203ENST00000526599 PDS5BQ9NTI5 1447 aa34.19■■■■□ 3.06
CHRNA10-203ENST00000526599 CFTRP13569 1480 aa34.13■■■■□ 3.05
CHRNA10-203ENST00000526599 KIF21AQ7Z4S6 1674 aa34.12■■■■□ 3.05
CHRNA10-203ENST00000526599 THOC2Q8NI27 1593 aaKnown RBP33.98■■■■□ 3.03
CHRNA10-203ENST00000526599 CUX2O14529 1486 aa33.96■■■■□ 3.03
CHRNA10-203ENST00000526599 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.02
CHRNA10-203ENST00000526599 CEP164Q9UPV0 1460 aa33.89■■■■□ 3.02
CHRNA10-203ENST00000526599 PRDM2Q13029 1718 aa33.86■■■■□ 3.01
CHRNA10-203ENST00000526599 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
CHRNA10-203ENST00000526599 WDR62O43379 1518 aa33.72■■■□□ 2.99
CHRNA10-203ENST00000526599 URB2Q14146 1524 aaKnown RBP33.62■■■□□ 2.97
CHRNA10-203ENST00000526599 TOPBP1Q92547 1522 aa33.41■■■□□ 2.94
CHRNA10-203ENST00000526599 ABCC8Q09428 1581 aa33.37■■■□□ 2.93
CHRNA10-203ENST00000526599 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
CHRNA10-203ENST00000526599 CUX1P39880 1505 aa33.18■■■□□ 2.9
CHRNA10-203ENST00000526599 IFT140Q96RY7 1462 aa33.17■■■□□ 2.9
CHRNA10-203ENST00000526599 POLA1P09884 1462 aaPredicted RBP33.13■■■□□ 2.89
CHRNA10-203ENST00000526599 ZNF608Q9ULD9 1512 aaPredicted RBP33.06■■■□□ 2.88
CHRNA10-203ENST00000526599 FGD5Q6ZNL6 1462 aa33.06■■■□□ 2.88
CHRNA10-203ENST00000526599 TARBP1Q13395 1621 aaKnown RBP33.05■■■□□ 2.88
CHRNA10-203ENST00000526599 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
CHRNA10-203ENST00000526599 SOGA1O94964 1423 aa33■■■□□ 2.87
CHRNA10-203ENST00000526599 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
CHRNA10-203ENST00000526599 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
CHRNA10-203ENST00000526599 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
CHRNA10-203ENST00000526599 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
CHRNA10-203ENST00000526599 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.86
CHRNA10-203ENST00000526599 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
CHRNA10-203ENST00000526599 BIVM-ERCC5R4GMW8 1640 aa32.88■■■□□ 2.85
CHRNA10-203ENST00000526599 TDRD9Q8NDG6 1382 aaKnown RBP32.84■■■□□ 2.85
CHRNA10-203ENST00000526599 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
CHRNA10-203ENST00000526599 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
CHRNA10-203ENST00000526599 GAPVD1Q14C86 1478 aa32.62■■■□□ 2.81
CHRNA10-203ENST00000526599 OSCARQ8IYS5 282 aa32.61■■■□□ 2.81
CHRNA10-203ENST00000526599 GRIN2BQ13224 1484 aa32.59■■■□□ 2.81
CHRNA10-203ENST00000526599 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
CHRNA10-203ENST00000526599 SNAPC4Q5SXM2 1469 aa32.56■■■□□ 2.8
CHRNA10-203ENST00000526599 PBRM1Q86U86 1689 aa32.54■■■□□ 2.8
CHRNA10-203ENST00000526599 CHIC1Q5VXU3 224 aa32.53■■■□□ 2.8
CHRNA10-203ENST00000526599 FBLN2P98095 1184 aa32.51■■■□□ 2.8
CHRNA10-203ENST00000526599 CHD1O14646 1710 aa32.5■■■□□ 2.79
CHRNA10-203ENST00000526599 MAGI1Q96QZ7 1491 aaPredicted RBP32.49■■■□□ 2.79
CHRNA10-203ENST00000526599 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
CHRNA10-203ENST00000526599 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
CHRNA10-203ENST00000526599 ERICH3Q5RHP9 1530 aa32.32■■■□□ 2.76
CHRNA10-203ENST00000526599 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
CHRNA10-203ENST00000526599 ADAMTS12P58397 1594 aa32.27■■■□□ 2.76
CHRNA10-203ENST00000526599 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
CHRNA10-203ENST00000526599 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
CHRNA10-203ENST00000526599 GRIN2AQ12879 1464 aa32.18■■■□□ 2.74
CHRNA10-203ENST00000526599 IGF1RP08069 1367 aa32.16■■■□□ 2.74
CHRNA10-203ENST00000526599 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
CHRNA10-203ENST00000526599 RIMBP3CA6NJZ7 1639 aa32.08■■■□□ 2.73
CHRNA10-203ENST00000526599 RIMBP3BA6NNM3 1639 aa32.08■■■□□ 2.73
CHRNA10-203ENST00000526599 RIMBP3Q9UFD9 1639 aa32.08■■■□□ 2.73
CHRNA10-203ENST00000526599 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
CHRNA10-203ENST00000526599 RUSC2Q8N2Y8 1516 aa32.04■■■□□ 2.72
CHRNA10-203ENST00000526599 CUL7Q14999 1698 aa32.03■■■□□ 2.72
CHRNA10-203ENST00000526599 CEP170Q5SW79 1584 aa32.03■■■□□ 2.72
CHRNA10-203ENST00000526599 NUP160Q12769 1436 aa32.02■■■□□ 2.72
CHRNA10-203ENST00000526599 CARMIL1Q5VZK9 1371 aa31.96■■■□□ 2.71
CHRNA10-203ENST00000526599 CYB5RLQ6IPT4 315 aa31.82■■■□□ 2.68
CHRNA10-203ENST00000526599 ARAP1Q96P48 1450 aa31.81■■■□□ 2.68
CHRNA10-203ENST00000526599 SHROOM2Q13796 1616 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms