RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-208ENST00000526369 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
PPFIA1-208ENST00000526369 ABCC9O60706 1549 aa22.21■■□□□ 1.15
PPFIA1-208ENST00000526369 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
PPFIA1-208ENST00000526369 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
PPFIA1-208ENST00000526369 RB1CC1Q8TDY2 1594 aa20.92■□□□□ 0.94
PPFIA1-208ENST00000526369 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
PPFIA1-208ENST00000526369 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
PPFIA1-208ENST00000526369 NACADO15069 1562 aa20.71■□□□□ 0.91
PPFIA1-208ENST00000526369 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.85
PPFIA1-208ENST00000526369 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
PPFIA1-208ENST00000526369 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
PPFIA1-208ENST00000526369 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
PPFIA1-208ENST00000526369 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
PPFIA1-208ENST00000526369 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
PPFIA1-208ENST00000526369 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
PPFIA1-208ENST00000526369 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
PPFIA1-208ENST00000526369 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
PPFIA1-208ENST00000526369 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
PPFIA1-208ENST00000526369 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
PPFIA1-208ENST00000526369 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
PPFIA1-208ENST00000526369 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
PPFIA1-208ENST00000526369 CUX2O14529 1486 aa19.12■□□□□ 0.65
PPFIA1-208ENST00000526369 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
PPFIA1-208ENST00000526369 NESP48681 1621 aa19■□□□□ 0.63
PPFIA1-208ENST00000526369 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PPFIA1-208ENST00000526369 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
PPFIA1-208ENST00000526369 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
PPFIA1-208ENST00000526369 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
PPFIA1-208ENST00000526369 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
PPFIA1-208ENST00000526369 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
PPFIA1-208ENST00000526369 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
PPFIA1-208ENST00000526369 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
PPFIA1-208ENST00000526369 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
PPFIA1-208ENST00000526369 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
PPFIA1-208ENST00000526369 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
PPFIA1-208ENST00000526369 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
PPFIA1-208ENST00000526369 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
PPFIA1-208ENST00000526369 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
PPFIA1-208ENST00000526369 WIZO95785 1651 aa18.49■□□□□ 0.55
PPFIA1-208ENST00000526369 WDR62O43379 1518 aa18.44■□□□□ 0.54
PPFIA1-208ENST00000526369 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
PPFIA1-208ENST00000526369 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
PPFIA1-208ENST00000526369 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
PPFIA1-208ENST00000526369 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
PPFIA1-208ENST00000526369 CFTRP13569 1480 aa18.32■□□□□ 0.52
PPFIA1-208ENST00000526369 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
PPFIA1-208ENST00000526369 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
PPFIA1-208ENST00000526369 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
PPFIA1-208ENST00000526369 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
PPFIA1-208ENST00000526369 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
PPFIA1-208ENST00000526369 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
PPFIA1-208ENST00000526369 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
PPFIA1-208ENST00000526369 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
PPFIA1-208ENST00000526369 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
PPFIA1-208ENST00000526369 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
PPFIA1-208ENST00000526369 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
PPFIA1-208ENST00000526369 FBLN2P98095 1184 aa17.97■□□□□ 0.47
PPFIA1-208ENST00000526369 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
PPFIA1-208ENST00000526369 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.465e-7■■■■□ 19.7
PPFIA1-208ENST00000526369 PRDM2Q13029 1718 aa17.93■□□□□ 0.46
PPFIA1-208ENST00000526369 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
PPFIA1-208ENST00000526369 EIF4G3O43432 1585 aaKnown RBP17.9■□□□□ 0.46
PPFIA1-208ENST00000526369 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
PPFIA1-208ENST00000526369 DNMBPQ6XZF7 1577 aa17.88■□□□□ 0.45
PPFIA1-208ENST00000526369 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
PPFIA1-208ENST00000526369 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
PPFIA1-208ENST00000526369 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
PPFIA1-208ENST00000526369 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
PPFIA1-208ENST00000526369 SOGA1O94964 1423 aa17.79■□□□□ 0.44
PPFIA1-208ENST00000526369 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
PPFIA1-208ENST00000526369 CHD1O14646 1710 aa17.77■□□□□ 0.44
PPFIA1-208ENST00000526369 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
PPFIA1-208ENST00000526369 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
PPFIA1-208ENST00000526369 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
PPFIA1-208ENST00000526369 CUX1P39880 1505 aa17.62■□□□□ 0.41
PPFIA1-208ENST00000526369 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
PPFIA1-208ENST00000526369 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
PPFIA1-208ENST00000526369 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
PPFIA1-208ENST00000526369 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
PPFIA1-208ENST00000526369 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
PPFIA1-208ENST00000526369 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
PPFIA1-208ENST00000526369 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
PPFIA1-208ENST00000526369 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
PPFIA1-208ENST00000526369 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
PPFIA1-208ENST00000526369 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
PPFIA1-208ENST00000526369 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
PPFIA1-208ENST00000526369 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PPFIA1-208ENST00000526369 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
PPFIA1-208ENST00000526369 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
PPFIA1-208ENST00000526369 ERCC6L2Q5T890 1561 aa17.37■□□□□ 0.37
PPFIA1-208ENST00000526369 NUP160Q12769 1436 aa17.3■□□□□ 0.36
PPFIA1-208ENST00000526369 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
PPFIA1-208ENST00000526369 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
PPFIA1-208ENST00000526369 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
PPFIA1-208ENST00000526369 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-208ENST00000526369 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
PPFIA1-208ENST00000526369 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
PPFIA1-208ENST00000526369 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
PPFIA1-208ENST00000526369 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
PPFIA1-208ENST00000526369 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms