RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 NISCHQ9Y2I1 1504 aa30.43■■■□□ 2.46
COLCA1-202ENST00000526150 CCDC180Q9P1Z9 1646 aa27.36■■□□□ 1.97
COLCA1-202ENST00000526150 ABCC9O60706 1549 aa27.36■■□□□ 1.97
COLCA1-202ENST00000526150 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
COLCA1-202ENST00000526150 NACADO15069 1562 aa25.9■■□□□ 1.74
COLCA1-202ENST00000526150 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
COLCA1-202ENST00000526150 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
COLCA1-202ENST00000526150 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
COLCA1-202ENST00000526150 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
COLCA1-202ENST00000526150 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
COLCA1-202ENST00000526150 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
COLCA1-202ENST00000526150 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
COLCA1-202ENST00000526150 DCAF1Q9Y4B6 1507 aa25.18■■□□□ 1.62
COLCA1-202ENST00000526150 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
COLCA1-202ENST00000526150 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
COLCA1-202ENST00000526150 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
COLCA1-202ENST00000526150 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
COLCA1-202ENST00000526150 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
COLCA1-202ENST00000526150 NCAPD3P42695 1498 aa23.9■■□□□ 1.42
COLCA1-202ENST00000526150 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
COLCA1-202ENST00000526150 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
COLCA1-202ENST00000526150 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
COLCA1-202ENST00000526150 DNAJC5Q9H3Z4 198 aa23.72■■□□□ 1.39
COLCA1-202ENST00000526150 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
COLCA1-202ENST00000526150 ERCC6Q03468 1493 aa23.7■■□□□ 1.38
COLCA1-202ENST00000526150 CUX2O14529 1486 aa23.68■■□□□ 1.38
COLCA1-202ENST00000526150 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
COLCA1-202ENST00000526150 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
COLCA1-202ENST00000526150 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
COLCA1-202ENST00000526150 NESP48681 1621 aa23.44■■□□□ 1.34
COLCA1-202ENST00000526150 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
COLCA1-202ENST00000526150 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
COLCA1-202ENST00000526150 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
COLCA1-202ENST00000526150 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
COLCA1-202ENST00000526150 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
COLCA1-202ENST00000526150 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
COLCA1-202ENST00000526150 WIZO95785 1651 aa23.11■■□□□ 1.29
COLCA1-202ENST00000526150 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
COLCA1-202ENST00000526150 WDR62O43379 1518 aa22.95■■□□□ 1.26
COLCA1-202ENST00000526150 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
COLCA1-202ENST00000526150 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
COLCA1-202ENST00000526150 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
COLCA1-202ENST00000526150 CFTRP13569 1480 aa22.88■■□□□ 1.25
COLCA1-202ENST00000526150 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
COLCA1-202ENST00000526150 URB2Q14146 1524 aaKnown RBP22.66■■□□□ 1.22
COLCA1-202ENST00000526150 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
COLCA1-202ENST00000526150 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
COLCA1-202ENST00000526150 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
COLCA1-202ENST00000526150 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
COLCA1-202ENST00000526150 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
COLCA1-202ENST00000526150 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
COLCA1-202ENST00000526150 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
COLCA1-202ENST00000526150 ZNF608Q9ULD9 1512 aaPredicted RBP22.37■■□□□ 1.17
COLCA1-202ENST00000526150 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
COLCA1-202ENST00000526150 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
COLCA1-202ENST00000526150 RIMBP3CA6NJZ7 1639 aa22.23■■□□□ 1.15
COLCA1-202ENST00000526150 RIMBP3BA6NNM3 1639 aa22.23■■□□□ 1.15
COLCA1-202ENST00000526150 RIMBP3Q9UFD9 1639 aa22.23■■□□□ 1.15
COLCA1-202ENST00000526150 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
COLCA1-202ENST00000526150 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.14
COLCA1-202ENST00000526150 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
COLCA1-202ENST00000526150 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
COLCA1-202ENST00000526150 FBLN2P98095 1184 aa22.15■■□□□ 1.14
COLCA1-202ENST00000526150 SOGA1O94964 1423 aa22.14■■□□□ 1.14
COLCA1-202ENST00000526150 CHD1O14646 1710 aa22.11■■□□□ 1.13
COLCA1-202ENST00000526150 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
COLCA1-202ENST00000526150 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
COLCA1-202ENST00000526150 TDRD9Q8NDG6 1382 aaKnown RBP22.07■■□□□ 1.12
COLCA1-202ENST00000526150 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
COLCA1-202ENST00000526150 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
COLCA1-202ENST00000526150 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
COLCA1-202ENST00000526150 CUX1P39880 1505 aa21.99■■□□□ 1.11
COLCA1-202ENST00000526150 SNAPC4Q5SXM2 1469 aa21.97■■□□□ 1.11
COLCA1-202ENST00000526150 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
COLCA1-202ENST00000526150 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
COLCA1-202ENST00000526150 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
COLCA1-202ENST00000526150 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
COLCA1-202ENST00000526150 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
COLCA1-202ENST00000526150 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
COLCA1-202ENST00000526150 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
COLCA1-202ENST00000526150 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
COLCA1-202ENST00000526150 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
COLCA1-202ENST00000526150 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.09
COLCA1-202ENST00000526150 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
COLCA1-202ENST00000526150 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
COLCA1-202ENST00000526150 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
COLCA1-202ENST00000526150 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
COLCA1-202ENST00000526150 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
COLCA1-202ENST00000526150 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
COLCA1-202ENST00000526150 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
COLCA1-202ENST00000526150 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
COLCA1-202ENST00000526150 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
COLCA1-202ENST00000526150 NUP160Q12769 1436 aa21.57■■□□□ 1.04
COLCA1-202ENST00000526150 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
COLCA1-202ENST00000526150 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
COLCA1-202ENST00000526150 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
COLCA1-202ENST00000526150 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
COLCA1-202ENST00000526150 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
COLCA1-202ENST00000526150 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
COLCA1-202ENST00000526150 NPM1P06748 294 aaKnown RBP eCLIP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms