RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
HHLA3-206ENST00000525653 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
HHLA3-206ENST00000525653 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
HHLA3-206ENST00000525653 ABCC9O60706 1549 aa19.85■□□□□ 0.77
HHLA3-206ENST00000525653 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
HHLA3-206ENST00000525653 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
HHLA3-206ENST00000525653 NACADO15069 1562 aa18.92■□□□□ 0.62
HHLA3-206ENST00000525653 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
HHLA3-206ENST00000525653 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
HHLA3-206ENST00000525653 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
HHLA3-206ENST00000525653 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
HHLA3-206ENST00000525653 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
HHLA3-206ENST00000525653 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
HHLA3-206ENST00000525653 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
HHLA3-206ENST00000525653 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
HHLA3-206ENST00000525653 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
HHLA3-206ENST00000525653 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
HHLA3-206ENST00000525653 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
HHLA3-206ENST00000525653 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
HHLA3-206ENST00000525653 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
HHLA3-206ENST00000525653 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
HHLA3-206ENST00000525653 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
HHLA3-206ENST00000525653 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
HHLA3-206ENST00000525653 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
HHLA3-206ENST00000525653 ATAD2BQ9ULI0 1458 aa17.35■□□□□ 0.37
HHLA3-206ENST00000525653 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
HHLA3-206ENST00000525653 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
HHLA3-206ENST00000525653 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
HHLA3-206ENST00000525653 CUX2O14529 1486 aa17.21■□□□□ 0.35
HHLA3-206ENST00000525653 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
HHLA3-206ENST00000525653 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
HHLA3-206ENST00000525653 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
HHLA3-206ENST00000525653 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
HHLA3-206ENST00000525653 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
HHLA3-206ENST00000525653 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
HHLA3-206ENST00000525653 NESP48681 1621 aa17.04■□□□□ 0.32
HHLA3-206ENST00000525653 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
HHLA3-206ENST00000525653 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
HHLA3-206ENST00000525653 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
HHLA3-206ENST00000525653 WIZO95785 1651 aa16.9■□□□□ 0.3
HHLA3-206ENST00000525653 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
HHLA3-206ENST00000525653 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
HHLA3-206ENST00000525653 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
HHLA3-206ENST00000525653 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
HHLA3-206ENST00000525653 WDR62O43379 1518 aa16.74■□□□□ 0.27
HHLA3-206ENST00000525653 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
HHLA3-206ENST00000525653 CFTRP13569 1480 aa16.7■□□□□ 0.26
HHLA3-206ENST00000525653 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
HHLA3-206ENST00000525653 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
HHLA3-206ENST00000525653 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
HHLA3-206ENST00000525653 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
HHLA3-206ENST00000525653 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
HHLA3-206ENST00000525653 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
HHLA3-206ENST00000525653 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
HHLA3-206ENST00000525653 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
HHLA3-206ENST00000525653 DNMBPQ6XZF7 1577 aa16.35■□□□□ 0.21
HHLA3-206ENST00000525653 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
HHLA3-206ENST00000525653 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.2
HHLA3-206ENST00000525653 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
HHLA3-206ENST00000525653 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
HHLA3-206ENST00000525653 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
HHLA3-206ENST00000525653 FOXD1Q16676 465 aa16.18■□□□□ 0.18
HHLA3-206ENST00000525653 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
HHLA3-206ENST00000525653 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
HHLA3-206ENST00000525653 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
HHLA3-206ENST00000525653 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
HHLA3-206ENST00000525653 CHD1O14646 1710 aa16.14■□□□□ 0.17
HHLA3-206ENST00000525653 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.17
HHLA3-206ENST00000525653 SOGA1O94964 1423 aa16.11■□□□□ 0.17
HHLA3-206ENST00000525653 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
HHLA3-206ENST00000525653 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
HHLA3-206ENST00000525653 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
HHLA3-206ENST00000525653 CUX1P39880 1505 aa16.07■□□□□ 0.16
HHLA3-206ENST00000525653 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
HHLA3-206ENST00000525653 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
HHLA3-206ENST00000525653 FBLN2P98095 1184 aa16.01■□□□□ 0.15
HHLA3-206ENST00000525653 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
HHLA3-206ENST00000525653 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
HHLA3-206ENST00000525653 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
HHLA3-206ENST00000525653 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
HHLA3-206ENST00000525653 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
HHLA3-206ENST00000525653 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
HHLA3-206ENST00000525653 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
HHLA3-206ENST00000525653 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
HHLA3-206ENST00000525653 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
HHLA3-206ENST00000525653 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
HHLA3-206ENST00000525653 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
HHLA3-206ENST00000525653 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
HHLA3-206ENST00000525653 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
HHLA3-206ENST00000525653 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
HHLA3-206ENST00000525653 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
HHLA3-206ENST00000525653 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
HHLA3-206ENST00000525653 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
HHLA3-206ENST00000525653 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
HHLA3-206ENST00000525653 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
HHLA3-206ENST00000525653 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
HHLA3-206ENST00000525653 NUP160Q12769 1436 aa15.75■□□□□ 0.11
HHLA3-206ENST00000525653 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
HHLA3-206ENST00000525653 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
HHLA3-206ENST00000525653 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms