RNA–Protein interactions for RNA: ENST00000525648.1

SNX15-204, Transcript of sorting nexin 15, humanhuman

TSL 3

Gene SNX15, Length 312 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-204ENST00000525648 NISCHQ9Y2I1 1504 aa45.29■■■■■ 4.84
SNX15-204ENST00000525648 CCDC180Q9P1Z9 1646 aa40.34■■■■■ 4.05
SNX15-204ENST00000525648 ABCC9O60706 1549 aa39.35■■■■□ 3.89
SNX15-204ENST00000525648 RB1CC1Q8TDY2 1594 aa37.92■■■■□ 3.66
SNX15-204ENST00000525648 NACADO15069 1562 aa37.89■■■■□ 3.66
SNX15-204ENST00000525648 ZCCHC6Q5VYS8 1495 aaKnown RBP37.76■■■■□ 3.63
SNX15-204ENST00000525648 DCAF8L2P0C7V8 631 aa37.72■■■■□ 3.63
SNX15-204ENST00000525648 MYO15BQ96JP2 1530 aa37.68■■■■□ 3.62
SNX15-204ENST00000525648 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.6
SNX15-204ENST00000525648 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
SNX15-204ENST00000525648 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
SNX15-204ENST00000525648 SCRIBQ14160 1630 aa36.74■■■■□ 3.47
SNX15-204ENST00000525648 PABPN1Q86U42 306 aaKnown RBP eCLIP36.72■■■■□ 3.47
SNX15-204ENST00000525648 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
SNX15-204ENST00000525648 DNAJC5BQ9UF47 199 aa36.04■■■■□ 3.36
SNX15-204ENST00000525648 EIF4G1Q04637 1599 aaKnown RBP35.79■■■■□ 3.32
SNX15-204ENST00000525648 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
SNX15-204ENST00000525648 CECR2Q9BXF3 1484 aa35.37■■■■□ 3.25
SNX15-204ENST00000525648 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
SNX15-204ENST00000525648 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
SNX15-204ENST00000525648 ATAD2BQ9ULI0 1458 aa34.95■■■■□ 3.19
SNX15-204ENST00000525648 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
SNX15-204ENST00000525648 NCAPD3P42695 1498 aa34.92■■■■□ 3.18
SNX15-204ENST00000525648 MROH2BQ7Z745 1585 aa34.88■■■■□ 3.17
SNX15-204ENST00000525648 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
SNX15-204ENST00000525648 HMGXB3Q12766 1538 aa34.8■■■■□ 3.16
SNX15-204ENST00000525648 BAZ1BQ9UIG0 1483 aaKnown RBP34.66■■■■□ 3.14
SNX15-204ENST00000525648 WIZO95785 1651 aa34.54■■■■□ 3.12
SNX15-204ENST00000525648 RSF1Q96T23 1441 aaPredicted RBP34.48■■■■□ 3.11
SNX15-204ENST00000525648 TOP2AP11388 1531 aaKnown RBP34.19■■■■□ 3.06
SNX15-204ENST00000525648 NESP48681 1621 aa34.04■■■■□ 3.04
SNX15-204ENST00000525648 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
SNX15-204ENST00000525648 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
SNX15-204ENST00000525648 CADPSQ9ULU8 1353 aa33.89■■■■□ 3.02
SNX15-204ENST00000525648 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
SNX15-204ENST00000525648 CCDC88BA6NC98 1476 aa33.74■■■□□ 2.99
SNX15-204ENST00000525648 KIF21AQ7Z4S6 1674 aa33.72■■■□□ 2.99
SNX15-204ENST00000525648 CFTRP13569 1480 aa33.71■■■□□ 2.99
SNX15-204ENST00000525648 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
SNX15-204ENST00000525648 CUX2O14529 1486 aa33.6■■■□□ 2.97
SNX15-204ENST00000525648 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
SNX15-204ENST00000525648 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
SNX15-204ENST00000525648 FANCD2Q9BXW9 1451 aa33.51■■■□□ 2.96
SNX15-204ENST00000525648 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
SNX15-204ENST00000525648 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
SNX15-204ENST00000525648 WDR62O43379 1518 aa33.34■■■□□ 2.93
SNX15-204ENST00000525648 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
SNX15-204ENST00000525648 ABCC8Q09428 1581 aa33.01■■■□□ 2.88
SNX15-204ENST00000525648 TOPBP1Q92547 1522 aa32.99■■■□□ 2.87
SNX15-204ENST00000525648 DNMBPQ6XZF7 1577 aa32.98■■■□□ 2.87
SNX15-204ENST00000525648 IFT140Q96RY7 1462 aa32.79■■■□□ 2.84
SNX15-204ENST00000525648 CUX1P39880 1505 aa32.74■■■□□ 2.83
SNX15-204ENST00000525648 POLA1P09884 1462 aaPredicted RBP32.71■■■□□ 2.83
SNX15-204ENST00000525648 TARBP1Q13395 1621 aaKnown RBP32.64■■■□□ 2.82
SNX15-204ENST00000525648 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
SNX15-204ENST00000525648 ZNF608Q9ULD9 1512 aaPredicted RBP32.61■■■□□ 2.81
SNX15-204ENST00000525648 SOGA1O94964 1423 aa32.54■■■□□ 2.8
SNX15-204ENST00000525648 RAD54L2Q9Y4B4 1467 aa32.54■■■□□ 2.8
SNX15-204ENST00000525648 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
SNX15-204ENST00000525648 WRNQ14191 1432 aaPredicted RBP eCLIP32.53■■■□□ 2.8
SNX15-204ENST00000525648 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.79
SNX15-204ENST00000525648 TOP2BQ02880 1626 aa32.49■■■□□ 2.79
SNX15-204ENST00000525648 DNAJC5Q9H3Z4 198 aa32.47■■■□□ 2.79
SNX15-204ENST00000525648 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
SNX15-204ENST00000525648 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
SNX15-204ENST00000525648 AQRO60306 1485 aaKnown RBP eCLIP32.41■■■□□ 2.78
SNX15-204ENST00000525648 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
SNX15-204ENST00000525648 ABCA10Q8WWZ4 1543 aa32.33■■■□□ 2.77
SNX15-204ENST00000525648 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
SNX15-204ENST00000525648 GRIN2BQ13224 1484 aa32.19■■■□□ 2.74
SNX15-204ENST00000525648 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
SNX15-204ENST00000525648 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
SNX15-204ENST00000525648 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
SNX15-204ENST00000525648 OSCARQ8IYS5 282 aa32.14■■■□□ 2.74
SNX15-204ENST00000525648 CHD1O14646 1710 aa32.13■■■□□ 2.73
SNX15-204ENST00000525648 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
SNX15-204ENST00000525648 SYNJ2O15056 1496 aa31.98■■■□□ 2.71
SNX15-204ENST00000525648 FBLN2P98095 1184 aa31.98■■■□□ 2.71
SNX15-204ENST00000525648 ERICH3Q5RHP9 1530 aa31.95■■■□□ 2.71
SNX15-204ENST00000525648 CHMP7Q8WUX9 453 aaPredicted RBP31.92■■■□□ 2.7
SNX15-204ENST00000525648 ADAMTS12P58397 1594 aa31.91■■■□□ 2.7
SNX15-204ENST00000525648 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
SNX15-204ENST00000525648 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
SNX15-204ENST00000525648 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
SNX15-204ENST00000525648 CLASP1Q7Z460 1538 aa31.76■■■□□ 2.68
SNX15-204ENST00000525648 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
SNX15-204ENST00000525648 CUL7Q14999 1698 aa31.7■■■□□ 2.66
SNX15-204ENST00000525648 RIMBP3CA6NJZ7 1639 aa31.69■■■□□ 2.66
SNX15-204ENST00000525648 RIMBP3BA6NNM3 1639 aa31.69■■■□□ 2.66
SNX15-204ENST00000525648 RIMBP3Q9UFD9 1639 aa31.69■■■□□ 2.66
SNX15-204ENST00000525648 IGF1RP08069 1367 aa31.68■■■□□ 2.66
SNX15-204ENST00000525648 ARHGEF11O15085 1522 aa31.67■■■□□ 2.66
SNX15-204ENST00000525648 NUP160Q12769 1436 aa31.65■■■□□ 2.66
SNX15-204ENST00000525648 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
SNX15-204ENST00000525648 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
SNX15-204ENST00000525648 CARMIL1Q5VZK9 1371 aa31.51■■■□□ 2.63
SNX15-204ENST00000525648 SHROOM2Q13796 1616 aa31.43■■■□□ 2.62
SNX15-204ENST00000525648 ARAP1Q96P48 1450 aa31.41■■■□□ 2.62
SNX15-204ENST00000525648 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
SNX15-204ENST00000525648 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms