RNA–Protein interactions for RNA: ENST00000525561.1

NUP214-214, Transcript of nucleoporin 214, humanhuman

TSL 4

Gene NUP214, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-214ENST00000525561 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
NUP214-214ENST00000525561 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
NUP214-214ENST00000525561 ABCC9O60706 1549 aa14.73□□□□□ -0.05
NUP214-214ENST00000525561 NACADO15069 1562 aa14.26□□□□□ -0.13
NUP214-214ENST00000525561 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
NUP214-214ENST00000525561 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
NUP214-214ENST00000525561 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
NUP214-214ENST00000525561 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
NUP214-214ENST00000525561 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
NUP214-214ENST00000525561 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
NUP214-214ENST00000525561 BICRAQ9NZM4 1560 aa13.86□□□□□ -0.19
NUP214-214ENST00000525561 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
NUP214-214ENST00000525561 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
NUP214-214ENST00000525561 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
NUP214-214ENST00000525561 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
NUP214-214ENST00000525561 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
NUP214-214ENST00000525561 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
NUP214-214ENST00000525561 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
NUP214-214ENST00000525561 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
NUP214-214ENST00000525561 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
NUP214-214ENST00000525561 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
NUP214-214ENST00000525561 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
NUP214-214ENST00000525561 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
NUP214-214ENST00000525561 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
NUP214-214ENST00000525561 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
NUP214-214ENST00000525561 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
NUP214-214ENST00000525561 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
NUP214-214ENST00000525561 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.34
NUP214-214ENST00000525561 WIZO95785 1651 aa12.91□□□□□ -0.34
NUP214-214ENST00000525561 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
NUP214-214ENST00000525561 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
NUP214-214ENST00000525561 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
NUP214-214ENST00000525561 NESP48681 1621 aa12.77□□□□□ -0.37
NUP214-214ENST00000525561 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
NUP214-214ENST00000525561 CHIC1Q5VXU3 224 aa12.72□□□□□ -0.37
NUP214-214ENST00000525561 CUX2O14529 1486 aa12.69□□□□□ -0.38
NUP214-214ENST00000525561 ERCC6Q03468 1493 aa12.68□□□□□ -0.38
NUP214-214ENST00000525561 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
NUP214-214ENST00000525561 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
NUP214-214ENST00000525561 CFTRP13569 1480 aa12.67□□□□□ -0.38
NUP214-214ENST00000525561 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
NUP214-214ENST00000525561 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
NUP214-214ENST00000525561 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
NUP214-214ENST00000525561 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
NUP214-214ENST00000525561 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
NUP214-214ENST00000525561 WDR62O43379 1518 aa12.54□□□□□ -0.4
NUP214-214ENST00000525561 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
NUP214-214ENST00000525561 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
NUP214-214ENST00000525561 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
NUP214-214ENST00000525561 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
NUP214-214ENST00000525561 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
NUP214-214ENST00000525561 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
NUP214-214ENST00000525561 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
NUP214-214ENST00000525561 IFT140Q96RY7 1462 aa12.3□□□□□ -0.44
NUP214-214ENST00000525561 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
NUP214-214ENST00000525561 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
NUP214-214ENST00000525561 CUX1P39880 1505 aa12.25□□□□□ -0.45
NUP214-214ENST00000525561 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
NUP214-214ENST00000525561 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
NUP214-214ENST00000525561 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
NUP214-214ENST00000525561 SOGA1O94964 1423 aa12.19□□□□□ -0.46
NUP214-214ENST00000525561 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
NUP214-214ENST00000525561 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
NUP214-214ENST00000525561 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
NUP214-214ENST00000525561 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
NUP214-214ENST00000525561 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■■ 63.2
NUP214-214ENST00000525561 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
NUP214-214ENST00000525561 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
NUP214-214ENST00000525561 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
NUP214-214ENST00000525561 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
NUP214-214ENST00000525561 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
NUP214-214ENST00000525561 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
NUP214-214ENST00000525561 CHD1O14646 1710 aa12.07□□□□□ -0.48
NUP214-214ENST00000525561 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
NUP214-214ENST00000525561 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
NUP214-214ENST00000525561 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
NUP214-214ENST00000525561 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
NUP214-214ENST00000525561 SYNJ2O15056 1496 aa12□□□□□ -0.49
NUP214-214ENST00000525561 SNAPC4Q5SXM2 1469 aa12□□□□□ -0.49
NUP214-214ENST00000525561 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
NUP214-214ENST00000525561 CLASP1Q7Z460 1538 aa11.95□□□□□ -0.5
NUP214-214ENST00000525561 CHMP7Q8WUX9 453 aaPredicted RBP11.94□□□□□ -0.5
NUP214-214ENST00000525561 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
NUP214-214ENST00000525561 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
NUP214-214ENST00000525561 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
NUP214-214ENST00000525561 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
NUP214-214ENST00000525561 FHAD1B1AJZ9 1412 aa11.92□□□□□ -0.5
NUP214-214ENST00000525561 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
NUP214-214ENST00000525561 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
NUP214-214ENST00000525561 FBLN2P98095 1184 aa11.9□□□□□ -0.5
NUP214-214ENST00000525561 NUP160Q12769 1436 aa11.9□□□□□ -0.5
NUP214-214ENST00000525561 IGF1RP08069 1367 aa11.89□□□□□ -0.51
NUP214-214ENST00000525561 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
NUP214-214ENST00000525561 CUL7Q14999 1698 aa11.86□□□□□ -0.51
NUP214-214ENST00000525561 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
NUP214-214ENST00000525561 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
NUP214-214ENST00000525561 ARAP1Q96P48 1450 aa11.81□□□□□ -0.52
NUP214-214ENST00000525561 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
NUP214-214ENST00000525561 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
NUP214-214ENST00000525561 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms