RNA–Protein interactions for RNA: ENST00000525432.1

NCAPD3-201, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 343 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-201ENST00000525432 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.54
NCAPD3-201ENST00000525432 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
NCAPD3-201ENST00000525432 ABCC9O60706 1549 aa21.98■■□□□ 1.11
NCAPD3-201ENST00000525432 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
NCAPD3-201ENST00000525432 NACADO15069 1562 aa20.89■□□□□ 0.94
NCAPD3-201ENST00000525432 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
NCAPD3-201ENST00000525432 DCAF8L2P0C7V8 631 aa20.64■□□□□ 0.89
NCAPD3-201ENST00000525432 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
NCAPD3-201ENST00000525432 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
NCAPD3-201ENST00000525432 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
NCAPD3-201ENST00000525432 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
NCAPD3-201ENST00000525432 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
NCAPD3-201ENST00000525432 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
NCAPD3-201ENST00000525432 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
NCAPD3-201ENST00000525432 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
NCAPD3-201ENST00000525432 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
NCAPD3-201ENST00000525432 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
NCAPD3-201ENST00000525432 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
NCAPD3-201ENST00000525432 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
NCAPD3-201ENST00000525432 SMARCA4P51532 1647 aa19.26■□□□□ 0.67
NCAPD3-201ENST00000525432 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
NCAPD3-201ENST00000525432 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
NCAPD3-201ENST00000525432 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
NCAPD3-201ENST00000525432 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
NCAPD3-201ENST00000525432 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
NCAPD3-201ENST00000525432 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
NCAPD3-201ENST00000525432 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
NCAPD3-201ENST00000525432 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
NCAPD3-201ENST00000525432 NESP48681 1621 aa18.94■□□□□ 0.62
NCAPD3-201ENST00000525432 CUX2O14529 1486 aa18.94■□□□□ 0.62
NCAPD3-201ENST00000525432 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
NCAPD3-201ENST00000525432 WIZO95785 1651 aa18.81■□□□□ 0.6
NCAPD3-201ENST00000525432 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
NCAPD3-201ENST00000525432 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
NCAPD3-201ENST00000525432 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
NCAPD3-201ENST00000525432 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
NCAPD3-201ENST00000525432 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
NCAPD3-201ENST00000525432 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
NCAPD3-201ENST00000525432 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
NCAPD3-201ENST00000525432 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
NCAPD3-201ENST00000525432 WDR62O43379 1518 aa18.53■□□□□ 0.56
NCAPD3-201ENST00000525432 CFTRP13569 1480 aa18.52■□□□□ 0.55
NCAPD3-201ENST00000525432 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
NCAPD3-201ENST00000525432 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
NCAPD3-201ENST00000525432 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
NCAPD3-201ENST00000525432 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
NCAPD3-201ENST00000525432 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
NCAPD3-201ENST00000525432 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
NCAPD3-201ENST00000525432 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
NCAPD3-201ENST00000525432 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
NCAPD3-201ENST00000525432 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
NCAPD3-201ENST00000525432 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
NCAPD3-201ENST00000525432 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.49
NCAPD3-201ENST00000525432 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
NCAPD3-201ENST00000525432 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
NCAPD3-201ENST00000525432 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
NCAPD3-201ENST00000525432 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
NCAPD3-201ENST00000525432 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
NCAPD3-201ENST00000525432 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.46
NCAPD3-201ENST00000525432 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
NCAPD3-201ENST00000525432 CUX1P39880 1505 aa17.88■□□□□ 0.45
NCAPD3-201ENST00000525432 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
NCAPD3-201ENST00000525432 RIMBP3CA6NJZ7 1639 aa17.85■□□□□ 0.45
NCAPD3-201ENST00000525432 RIMBP3BA6NNM3 1639 aa17.85■□□□□ 0.45
NCAPD3-201ENST00000525432 CHD1O14646 1710 aa17.85■□□□□ 0.45
NCAPD3-201ENST00000525432 RIMBP3Q9UFD9 1639 aa17.85■□□□□ 0.45
NCAPD3-201ENST00000525432 SOGA1O94964 1423 aa17.84■□□□□ 0.45
NCAPD3-201ENST00000525432 WDR97A6NE52 1622 aa17.83■□□□□ 0.45
NCAPD3-201ENST00000525432 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
NCAPD3-201ENST00000525432 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
NCAPD3-201ENST00000525432 SNAPC4Q5SXM2 1469 aa17.74■□□□□ 0.43
NCAPD3-201ENST00000525432 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
NCAPD3-201ENST00000525432 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
NCAPD3-201ENST00000525432 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
NCAPD3-201ENST00000525432 FBLN2P98095 1184 aa17.68■□□□□ 0.42
NCAPD3-201ENST00000525432 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
NCAPD3-201ENST00000525432 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
NCAPD3-201ENST00000525432 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
NCAPD3-201ENST00000525432 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
NCAPD3-201ENST00000525432 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
NCAPD3-201ENST00000525432 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
NCAPD3-201ENST00000525432 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
NCAPD3-201ENST00000525432 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
NCAPD3-201ENST00000525432 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
NCAPD3-201ENST00000525432 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
NCAPD3-201ENST00000525432 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
NCAPD3-201ENST00000525432 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
NCAPD3-201ENST00000525432 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
NCAPD3-201ENST00000525432 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
NCAPD3-201ENST00000525432 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
NCAPD3-201ENST00000525432 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
NCAPD3-201ENST00000525432 NUP160Q12769 1436 aa17.45■□□□□ 0.38
NCAPD3-201ENST00000525432 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
NCAPD3-201ENST00000525432 FHAD1B1AJZ9 1412 aa17.43■□□□□ 0.38
NCAPD3-201ENST00000525432 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
NCAPD3-201ENST00000525432 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
NCAPD3-201ENST00000525432 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
NCAPD3-201ENST00000525432 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
NCAPD3-201ENST00000525432 IGF1RP08069 1367 aa17.23■□□□□ 0.35
NCAPD3-201ENST00000525432 CUL7Q14999 1698 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms