RNA–Protein interactions for RNA: ENST00000525259.1

SOX6-205, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-205ENST00000525259 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
SOX6-205ENST00000525259 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
SOX6-205ENST00000525259 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
SOX6-205ENST00000525259 ABCC9O60706 1549 aa18.79■□□□□ 0.6
SOX6-205ENST00000525259 RB1CC1Q8TDY2 1594 aa18.02■□□□□ 0.48
SOX6-205ENST00000525259 NACADO15069 1562 aa17.93■□□□□ 0.46
SOX6-205ENST00000525259 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
SOX6-205ENST00000525259 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
SOX6-205ENST00000525259 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.43
SOX6-205ENST00000525259 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
SOX6-205ENST00000525259 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
SOX6-205ENST00000525259 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
SOX6-205ENST00000525259 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
SOX6-205ENST00000525259 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
SOX6-205ENST00000525259 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
SOX6-205ENST00000525259 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
SOX6-205ENST00000525259 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
SOX6-205ENST00000525259 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.31
SOX6-205ENST00000525259 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
SOX6-205ENST00000525259 CECR2Q9BXF3 1484 aa16.92■□□□□ 0.3
SOX6-205ENST00000525259 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
SOX6-205ENST00000525259 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
SOX6-205ENST00000525259 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
SOX6-205ENST00000525259 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
SOX6-205ENST00000525259 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
SOX6-205ENST00000525259 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
SOX6-205ENST00000525259 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
SOX6-205ENST00000525259 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
SOX6-205ENST00000525259 BAZ1BQ9UIG0 1483 aaKnown RBP16.4■□□□□ 0.22
SOX6-205ENST00000525259 MROH2BQ7Z745 1585 aa16.37■□□□□ 0.21
SOX6-205ENST00000525259 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
SOX6-205ENST00000525259 WIZO95785 1651 aa16.18■□□□□ 0.18
SOX6-205ENST00000525259 NESP48681 1621 aa16.17■□□□□ 0.18
SOX6-205ENST00000525259 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
SOX6-205ENST00000525259 CUX2O14529 1486 aa16.15■□□□□ 0.18
SOX6-205ENST00000525259 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
SOX6-205ENST00000525259 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
SOX6-205ENST00000525259 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
SOX6-205ENST00000525259 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
SOX6-205ENST00000525259 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
SOX6-205ENST00000525259 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
SOX6-205ENST00000525259 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
SOX6-205ENST00000525259 CFTRP13569 1480 aa15.91■□□□□ 0.14
SOX6-205ENST00000525259 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
SOX6-205ENST00000525259 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
SOX6-205ENST00000525259 FANCD2Q9BXW9 1451 aa15.87■□□□□ 0.13
SOX6-205ENST00000525259 WDR62O43379 1518 aa15.86■□□□□ 0.13
SOX6-205ENST00000525259 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
SOX6-205ENST00000525259 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
SOX6-205ENST00000525259 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
SOX6-205ENST00000525259 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
SOX6-205ENST00000525259 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
SOX6-205ENST00000525259 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
SOX6-205ENST00000525259 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
SOX6-205ENST00000525259 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
SOX6-205ENST00000525259 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
SOX6-205ENST00000525259 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
SOX6-205ENST00000525259 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
SOX6-205ENST00000525259 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
SOX6-205ENST00000525259 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
SOX6-205ENST00000525259 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
SOX6-205ENST00000525259 FOXD1Q16676 465 aa15.39■□□□□ 0.05
SOX6-205ENST00000525259 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
SOX6-205ENST00000525259 CUX1P39880 1505 aa15.38■□□□□ 0.05
SOX6-205ENST00000525259 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
SOX6-205ENST00000525259 SOGA1O94964 1423 aa15.35■□□□□ 0.05
SOX6-205ENST00000525259 RAD54L2Q9Y4B4 1467 aa15.35■□□□□ 0.05
SOX6-205ENST00000525259 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
SOX6-205ENST00000525259 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.05
SOX6-205ENST00000525259 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
SOX6-205ENST00000525259 CHD1O14646 1710 aa15.26■□□□□ 0.03
SOX6-205ENST00000525259 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
SOX6-205ENST00000525259 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
SOX6-205ENST00000525259 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
SOX6-205ENST00000525259 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
SOX6-205ENST00000525259 MAGI1Q96QZ7 1491 aaPredicted RBP15.23■□□□□ 0.03
SOX6-205ENST00000525259 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
SOX6-205ENST00000525259 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
SOX6-205ENST00000525259 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
SOX6-205ENST00000525259 FBLN2P98095 1184 aa15.21■□□□□ 0.03
SOX6-205ENST00000525259 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
SOX6-205ENST00000525259 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
SOX6-205ENST00000525259 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
SOX6-205ENST00000525259 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
SOX6-205ENST00000525259 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
SOX6-205ENST00000525259 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
SOX6-205ENST00000525259 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
SOX6-205ENST00000525259 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
SOX6-205ENST00000525259 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
SOX6-205ENST00000525259 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
SOX6-205ENST00000525259 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
SOX6-205ENST00000525259 ADAMTS12P58397 1594 aa15.08■□□□□ 0
SOX6-205ENST00000525259 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
SOX6-205ENST00000525259 GRIN2AQ12879 1464 aa15.04■□□□□ -0
SOX6-205ENST00000525259 ARAP1Q96P48 1450 aa15.04■□□□□ -0
SOX6-205ENST00000525259 FHAD1B1AJZ9 1412 aa15.02■□□□□ -0
SOX6-205ENST00000525259 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
SOX6-205ENST00000525259 NUP160Q12769 1436 aa14.97□□□□□ -0.01
SOX6-205ENST00000525259 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
SOX6-205ENST00000525259 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms