RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 NISCHQ9Y2I1 1504 aa35.46■■■■□ 3.27
PABPC4-219ENST00000525045 ABCC9O60706 1549 aa32.05■■■□□ 2.72
PABPC4-219ENST00000525045 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
PABPC4-219ENST00000525045 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
PABPC4-219ENST00000525045 NACADO15069 1562 aa30.24■■■□□ 2.43
PABPC4-219ENST00000525045 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
PABPC4-219ENST00000525045 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
PABPC4-219ENST00000525045 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
PABPC4-219ENST00000525045 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
PABPC4-219ENST00000525045 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
PABPC4-219ENST00000525045 BICRAQ9NZM4 1560 aa29.51■■■□□ 2.31
PABPC4-219ENST00000525045 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
PABPC4-219ENST00000525045 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
PABPC4-219ENST00000525045 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
PABPC4-219ENST00000525045 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
PABPC4-219ENST00000525045 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
PABPC4-219ENST00000525045 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
PABPC4-219ENST00000525045 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
PABPC4-219ENST00000525045 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
PABPC4-219ENST00000525045 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
PABPC4-219ENST00000525045 CUX2O14529 1486 aa27.78■■■□□ 2.04
PABPC4-219ENST00000525045 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
PABPC4-219ENST00000525045 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
PABPC4-219ENST00000525045 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
PABPC4-219ENST00000525045 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
PABPC4-219ENST00000525045 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
PABPC4-219ENST00000525045 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
PABPC4-219ENST00000525045 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
PABPC4-219ENST00000525045 NESP48681 1621 aa27.45■■□□□ 1.98
PABPC4-219ENST00000525045 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
PABPC4-219ENST00000525045 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
PABPC4-219ENST00000525045 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
PABPC4-219ENST00000525045 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
PABPC4-219ENST00000525045 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
PABPC4-219ENST00000525045 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
PABPC4-219ENST00000525045 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.92
PABPC4-219ENST00000525045 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
PABPC4-219ENST00000525045 WIZO95785 1651 aa26.92■■□□□ 1.9
PABPC4-219ENST00000525045 WDR62O43379 1518 aa26.83■■□□□ 1.89
PABPC4-219ENST00000525045 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
PABPC4-219ENST00000525045 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
PABPC4-219ENST00000525045 CFTRP13569 1480 aa26.7■■□□□ 1.87
PABPC4-219ENST00000525045 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
PABPC4-219ENST00000525045 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
PABPC4-219ENST00000525045 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
PABPC4-219ENST00000525045 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
PABPC4-219ENST00000525045 URB2Q14146 1524 aaKnown RBP26.48■■□□□ 1.83
PABPC4-219ENST00000525045 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
PABPC4-219ENST00000525045 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
PABPC4-219ENST00000525045 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
PABPC4-219ENST00000525045 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
PABPC4-219ENST00000525045 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
PABPC4-219ENST00000525045 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
PABPC4-219ENST00000525045 RIMBP3CA6NJZ7 1639 aa26.08■■□□□ 1.77
PABPC4-219ENST00000525045 RIMBP3BA6NNM3 1639 aa26.08■■□□□ 1.77
PABPC4-219ENST00000525045 RIMBP3Q9UFD9 1639 aa26.08■■□□□ 1.77
PABPC4-219ENST00000525045 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
PABPC4-219ENST00000525045 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
PABPC4-219ENST00000525045 ARHGEF11O15085 1522 aa26■■□□□ 1.75
PABPC4-219ENST00000525045 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.758e-11■■■■■ 43.3
PABPC4-219ENST00000525045 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
PABPC4-219ENST00000525045 FBLN2P98095 1184 aa25.91■■□□□ 1.74
PABPC4-219ENST00000525045 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
PABPC4-219ENST00000525045 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PABPC4-219ENST00000525045 SOGA1O94964 1423 aa25.85■■□□□ 1.73
PABPC4-219ENST00000525045 CHD1O14646 1710 aa25.85■■□□□ 1.73
PABPC4-219ENST00000525045 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
PABPC4-219ENST00000525045 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
PABPC4-219ENST00000525045 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
PABPC4-219ENST00000525045 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
PABPC4-219ENST00000525045 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
PABPC4-219ENST00000525045 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
PABPC4-219ENST00000525045 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
PABPC4-219ENST00000525045 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PABPC4-219ENST00000525045 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
PABPC4-219ENST00000525045 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
PABPC4-219ENST00000525045 CUX1P39880 1505 aa25.63■■□□□ 1.69
PABPC4-219ENST00000525045 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
PABPC4-219ENST00000525045 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
PABPC4-219ENST00000525045 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
PABPC4-219ENST00000525045 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
PABPC4-219ENST00000525045 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
PABPC4-219ENST00000525045 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
PABPC4-219ENST00000525045 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
PABPC4-219ENST00000525045 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
PABPC4-219ENST00000525045 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
PABPC4-219ENST00000525045 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
PABPC4-219ENST00000525045 TOP2BQ02880 1626 aa25.2■■□□□ 1.62
PABPC4-219ENST00000525045 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
PABPC4-219ENST00000525045 NUP160Q12769 1436 aa25.2■■□□□ 1.62
PABPC4-219ENST00000525045 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
PABPC4-219ENST00000525045 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
PABPC4-219ENST00000525045 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
PABPC4-219ENST00000525045 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
PABPC4-219ENST00000525045 CEP170Q5SW79 1584 aa25.13■■□□□ 1.61
PABPC4-219ENST00000525045 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
PABPC4-219ENST00000525045 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
PABPC4-219ENST00000525045 JPH4Q96JJ6 628 aa25.04■■□□□ 1.6
PABPC4-219ENST00000525045 PRG4Q92954 1404 aaPredicted RBP25■■□□□ 1.59
PABPC4-219ENST00000525045 NPM1P06748 294 aaKnown RBP eCLIP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms