RNA–Protein interactions for RNA: ENST00000524742.5

ALKBH3-202, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 842 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-202ENST00000524742 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
ALKBH3-202ENST00000524742 ABCC9O60706 1549 aa35.04■■■■□ 3.2
ALKBH3-202ENST00000524742 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
ALKBH3-202ENST00000524742 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
ALKBH3-202ENST00000524742 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
ALKBH3-202ENST00000524742 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
ALKBH3-202ENST00000524742 NACADO15069 1562 aa32.37■■■□□ 2.77
ALKBH3-202ENST00000524742 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
ALKBH3-202ENST00000524742 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
ALKBH3-202ENST00000524742 DCAF8L2P0C7V8 631 aa31.95■■■□□ 2.71
ALKBH3-202ENST00000524742 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
ALKBH3-202ENST00000524742 CECR2Q9BXF3 1484 aa31.74■■■□□ 2.67
ALKBH3-202ENST00000524742 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
ALKBH3-202ENST00000524742 MYO15BQ96JP2 1530 aa31.56■■■□□ 2.64
ALKBH3-202ENST00000524742 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
ALKBH3-202ENST00000524742 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
ALKBH3-202ENST00000524742 CUX2O14529 1486 aa30.77■■■□□ 2.52
ALKBH3-202ENST00000524742 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
ALKBH3-202ENST00000524742 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
ALKBH3-202ENST00000524742 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
ALKBH3-202ENST00000524742 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
ALKBH3-202ENST00000524742 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
ALKBH3-202ENST00000524742 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
ALKBH3-202ENST00000524742 NESP48681 1621 aa29.74■■■□□ 2.35
ALKBH3-202ENST00000524742 THOC2Q8NI27 1593 aaKnown RBP29.68■■■□□ 2.34
ALKBH3-202ENST00000524742 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
ALKBH3-202ENST00000524742 HMGXB3Q12766 1538 aa29.54■■■□□ 2.32
ALKBH3-202ENST00000524742 SMARCA2P51531 1590 aa29.48■■■□□ 2.31
ALKBH3-202ENST00000524742 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
ALKBH3-202ENST00000524742 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
ALKBH3-202ENST00000524742 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
ALKBH3-202ENST00000524742 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
ALKBH3-202ENST00000524742 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
ALKBH3-202ENST00000524742 OSCARQ8IYS5 282 aa29.23■■■□□ 2.27
ALKBH3-202ENST00000524742 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
ALKBH3-202ENST00000524742 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
ALKBH3-202ENST00000524742 WDR62O43379 1518 aa29.04■■■□□ 2.24
ALKBH3-202ENST00000524742 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
ALKBH3-202ENST00000524742 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
ALKBH3-202ENST00000524742 RIMBP3CA6NJZ7 1639 aa28.84■■■□□ 2.21
ALKBH3-202ENST00000524742 RIMBP3BA6NNM3 1639 aa28.84■■■□□ 2.21
ALKBH3-202ENST00000524742 RIMBP3Q9UFD9 1639 aa28.84■■■□□ 2.21
ALKBH3-202ENST00000524742 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
ALKBH3-202ENST00000524742 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
ALKBH3-202ENST00000524742 TRHP20396 242 aaPredicted RBP28.66■■■□□ 2.18
ALKBH3-202ENST00000524742 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
ALKBH3-202ENST00000524742 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
ALKBH3-202ENST00000524742 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
ALKBH3-202ENST00000524742 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
ALKBH3-202ENST00000524742 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
ALKBH3-202ENST00000524742 CFTRP13569 1480 aa28.35■■■□□ 2.13
ALKBH3-202ENST00000524742 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
ALKBH3-202ENST00000524742 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
ALKBH3-202ENST00000524742 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
ALKBH3-202ENST00000524742 WIZO95785 1651 aa28.17■■■□□ 2.1
ALKBH3-202ENST00000524742 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
ALKBH3-202ENST00000524742 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
ALKBH3-202ENST00000524742 CHD1O14646 1710 aa27.99■■■□□ 2.07
ALKBH3-202ENST00000524742 FBLN2P98095 1184 aa27.95■■■□□ 2.06
ALKBH3-202ENST00000524742 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
ALKBH3-202ENST00000524742 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
ALKBH3-202ENST00000524742 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.051e-6■■■■■ 48.7
ALKBH3-202ENST00000524742 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
ALKBH3-202ENST00000524742 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
ALKBH3-202ENST00000524742 TARBP1Q13395 1621 aaKnown RBP27.72■■■□□ 2.03
ALKBH3-202ENST00000524742 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
ALKBH3-202ENST00000524742 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
ALKBH3-202ENST00000524742 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
ALKBH3-202ENST00000524742 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
ALKBH3-202ENST00000524742 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
ALKBH3-202ENST00000524742 POLA1P09884 1462 aaPredicted RBP27.53■■■□□ 2
ALKBH3-202ENST00000524742 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
ALKBH3-202ENST00000524742 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
ALKBH3-202ENST00000524742 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
ALKBH3-202ENST00000524742 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
ALKBH3-202ENST00000524742 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
ALKBH3-202ENST00000524742 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
ALKBH3-202ENST00000524742 SOGA1O94964 1423 aa27.43■■□□□ 1.98
ALKBH3-202ENST00000524742 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
ALKBH3-202ENST00000524742 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
ALKBH3-202ENST00000524742 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
ALKBH3-202ENST00000524742 KDM4FA0A1W2PPD8 638 aa27.24■■□□□ 1.95
ALKBH3-202ENST00000524742 KIF13AQ9H1H9 1805 aa27.18■■□□□ 1.94
ALKBH3-202ENST00000524742 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
ALKBH3-202ENST00000524742 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.93
ALKBH3-202ENST00000524742 FAM69CQ0P6D2 419 aa27.03■■□□□ 1.92
ALKBH3-202ENST00000524742 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
ALKBH3-202ENST00000524742 CEP170Q5SW79 1584 aa27.01■■□□□ 1.92
ALKBH3-202ENST00000524742 ABCC10Q5T3U5 1492 aa26.98■■□□□ 1.91
ALKBH3-202ENST00000524742 CUX1P39880 1505 aa26.95■■□□□ 1.9
ALKBH3-202ENST00000524742 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
ALKBH3-202ENST00000524742 NUP160Q12769 1436 aa26.92■■□□□ 1.9
ALKBH3-202ENST00000524742 KDM6BO15054 1643 aa26.9■■□□□ 1.9
ALKBH3-202ENST00000524742 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
ALKBH3-202ENST00000524742 NPM1P06748 294 aaKnown RBP eCLIP26.87■■□□□ 1.89
ALKBH3-202ENST00000524742 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
ALKBH3-202ENST00000524742 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
ALKBH3-202ENST00000524742 MAPKBP1O60336 1514 aa26.81■■□□□ 1.88
ALKBH3-202ENST00000524742 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
ALKBH3-202ENST00000524742 PRG4Q92954 1404 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms