RNA–Protein interactions for RNA: ENST00000524650.1

SOX6-204, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-204ENST00000524650 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
SOX6-204ENST00000524650 ABCC9O60706 1549 aa14.25□□□□□ -0.13
SOX6-204ENST00000524650 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
SOX6-204ENST00000524650 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
SOX6-204ENST00000524650 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
SOX6-204ENST00000524650 NACADO15069 1562 aa13.43□□□□□ -0.26
SOX6-204ENST00000524650 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
SOX6-204ENST00000524650 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
SOX6-204ENST00000524650 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
SOX6-204ENST00000524650 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
SOX6-204ENST00000524650 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
SOX6-204ENST00000524650 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
SOX6-204ENST00000524650 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
SOX6-204ENST00000524650 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
SOX6-204ENST00000524650 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
SOX6-204ENST00000524650 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
SOX6-204ENST00000524650 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
SOX6-204ENST00000524650 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
SOX6-204ENST00000524650 CECR2Q9BXF3 1484 aa12.8□□□□□ -0.36
SOX6-204ENST00000524650 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
SOX6-204ENST00000524650 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
SOX6-204ENST00000524650 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
SOX6-204ENST00000524650 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
SOX6-204ENST00000524650 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
SOX6-204ENST00000524650 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
SOX6-204ENST00000524650 ERCC6Q03468 1493 aa12.32□□□□□ -0.44
SOX6-204ENST00000524650 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
SOX6-204ENST00000524650 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
SOX6-204ENST00000524650 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.44
SOX6-204ENST00000524650 NESP48681 1621 aa12.23□□□□□ -0.45
SOX6-204ENST00000524650 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
SOX6-204ENST00000524650 CUX2O14529 1486 aa12.18□□□□□ -0.46
SOX6-204ENST00000524650 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
SOX6-204ENST00000524650 WIZO95785 1651 aa12.13□□□□□ -0.47
SOX6-204ENST00000524650 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
SOX6-204ENST00000524650 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
SOX6-204ENST00000524650 CADPSQ9ULU8 1353 aa12.06□□□□□ -0.48
SOX6-204ENST00000524650 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
SOX6-204ENST00000524650 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
SOX6-204ENST00000524650 THOC2Q8NI27 1593 aaKnown RBP12.03□□□□□ -0.48
SOX6-204ENST00000524650 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
SOX6-204ENST00000524650 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
SOX6-204ENST00000524650 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
SOX6-204ENST00000524650 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
SOX6-204ENST00000524650 CFTRP13569 1480 aa11.91□□□□□ -0.5
SOX6-204ENST00000524650 WDR62O43379 1518 aa11.9□□□□□ -0.5
SOX6-204ENST00000524650 CCDC88BA6NC98 1476 aa11.86□□□□□ -0.51
SOX6-204ENST00000524650 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
SOX6-204ENST00000524650 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
SOX6-204ENST00000524650 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
SOX6-204ENST00000524650 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
SOX6-204ENST00000524650 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
SOX6-204ENST00000524650 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
SOX6-204ENST00000524650 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
SOX6-204ENST00000524650 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
SOX6-204ENST00000524650 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
SOX6-204ENST00000524650 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
SOX6-204ENST00000524650 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
SOX6-204ENST00000524650 FBLN2P98095 1184 aa11.61□□□□□ -0.55
SOX6-204ENST00000524650 AQRO60306 1485 aaKnown RBP eCLIP11.6□□□□□ -0.55
SOX6-204ENST00000524650 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
SOX6-204ENST00000524650 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
SOX6-204ENST00000524650 SOGA1O94964 1423 aa11.58□□□□□ -0.56
SOX6-204ENST00000524650 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
SOX6-204ENST00000524650 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
SOX6-204ENST00000524650 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
SOX6-204ENST00000524650 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
SOX6-204ENST00000524650 CUX1P39880 1505 aa11.53□□□□□ -0.56
SOX6-204ENST00000524650 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
SOX6-204ENST00000524650 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
SOX6-204ENST00000524650 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
SOX6-204ENST00000524650 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
SOX6-204ENST00000524650 CHD1O14646 1710 aa11.49□□□□□ -0.57
SOX6-204ENST00000524650 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
SOX6-204ENST00000524650 ARHGEF11O15085 1522 aa11.47□□□□□ -0.57
SOX6-204ENST00000524650 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
SOX6-204ENST00000524650 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
SOX6-204ENST00000524650 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
SOX6-204ENST00000524650 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
SOX6-204ENST00000524650 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
SOX6-204ENST00000524650 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
SOX6-204ENST00000524650 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
SOX6-204ENST00000524650 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
SOX6-204ENST00000524650 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
SOX6-204ENST00000524650 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
SOX6-204ENST00000524650 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
SOX6-204ENST00000524650 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
SOX6-204ENST00000524650 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
SOX6-204ENST00000524650 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
SOX6-204ENST00000524650 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
SOX6-204ENST00000524650 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
SOX6-204ENST00000524650 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
SOX6-204ENST00000524650 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
SOX6-204ENST00000524650 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
SOX6-204ENST00000524650 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
SOX6-204ENST00000524650 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
SOX6-204ENST00000524650 NUP160Q12769 1436 aa11.22□□□□□ -0.61
SOX6-204ENST00000524650 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
SOX6-204ENST00000524650 JPH4Q96JJ6 628 aa11.18□□□□□ -0.62
SOX6-204ENST00000524650 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms