RNA–Protein interactions for RNA: ENST00000524638.1

GFI1B-205, Transcript of growth factor independent 1B transcriptional repressor, humanhuman

TSL 2

Gene GFI1B, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1B-205ENST00000524638 NISCHQ9Y2I1 1504 aa28.17■■■□□ 2.1
GFI1B-205ENST00000524638 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
GFI1B-205ENST00000524638 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
GFI1B-205ENST00000524638 ABCC9O60706 1549 aa25.14■■□□□ 1.62
GFI1B-205ENST00000524638 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.6
GFI1B-205ENST00000524638 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
GFI1B-205ENST00000524638 NACADO15069 1562 aa23.83■■□□□ 1.41
GFI1B-205ENST00000524638 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
GFI1B-205ENST00000524638 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
GFI1B-205ENST00000524638 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
GFI1B-205ENST00000524638 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
GFI1B-205ENST00000524638 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
GFI1B-205ENST00000524638 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
GFI1B-205ENST00000524638 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
GFI1B-205ENST00000524638 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
GFI1B-205ENST00000524638 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
GFI1B-205ENST00000524638 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
GFI1B-205ENST00000524638 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
GFI1B-205ENST00000524638 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
GFI1B-205ENST00000524638 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
GFI1B-205ENST00000524638 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
GFI1B-205ENST00000524638 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
GFI1B-205ENST00000524638 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
GFI1B-205ENST00000524638 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
GFI1B-205ENST00000524638 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
GFI1B-205ENST00000524638 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
GFI1B-205ENST00000524638 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
GFI1B-205ENST00000524638 HMGXB3Q12766 1538 aa21.81■■□□□ 1.08
GFI1B-205ENST00000524638 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
GFI1B-205ENST00000524638 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
GFI1B-205ENST00000524638 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
GFI1B-205ENST00000524638 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
GFI1B-205ENST00000524638 CUX2O14529 1486 aa21.68■■□□□ 1.06
GFI1B-205ENST00000524638 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
GFI1B-205ENST00000524638 NESP48681 1621 aa21.61■■□□□ 1.05
GFI1B-205ENST00000524638 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
GFI1B-205ENST00000524638 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
GFI1B-205ENST00000524638 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
GFI1B-205ENST00000524638 RSF1Q96T23 1441 aaPredicted RBP21.33■■□□□ 1.01
GFI1B-205ENST00000524638 WIZO95785 1651 aa21.31■■□□□ 1
GFI1B-205ENST00000524638 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
GFI1B-205ENST00000524638 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
GFI1B-205ENST00000524638 CFTRP13569 1480 aa21.17■□□□□ 0.98
GFI1B-205ENST00000524638 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
GFI1B-205ENST00000524638 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
GFI1B-205ENST00000524638 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
GFI1B-205ENST00000524638 WDR62O43379 1518 aa21.09■□□□□ 0.97
GFI1B-205ENST00000524638 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
GFI1B-205ENST00000524638 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
GFI1B-205ENST00000524638 FOXD1Q16676 465 aa21.01■□□□□ 0.95
GFI1B-205ENST00000524638 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
GFI1B-205ENST00000524638 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
GFI1B-205ENST00000524638 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
GFI1B-205ENST00000524638 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
GFI1B-205ENST00000524638 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
GFI1B-205ENST00000524638 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
GFI1B-205ENST00000524638 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
GFI1B-205ENST00000524638 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.9
GFI1B-205ENST00000524638 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
GFI1B-205ENST00000524638 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
GFI1B-205ENST00000524638 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
GFI1B-205ENST00000524638 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
GFI1B-205ENST00000524638 SOGA1O94964 1423 aa20.47■□□□□ 0.87
GFI1B-205ENST00000524638 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
GFI1B-205ENST00000524638 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
GFI1B-205ENST00000524638 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
GFI1B-205ENST00000524638 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
GFI1B-205ENST00000524638 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
GFI1B-205ENST00000524638 FBLN2P98095 1184 aa20.37■□□□□ 0.85
GFI1B-205ENST00000524638 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
GFI1B-205ENST00000524638 CUX1P39880 1505 aa20.34■□□□□ 0.85
GFI1B-205ENST00000524638 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
GFI1B-205ENST00000524638 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
GFI1B-205ENST00000524638 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
GFI1B-205ENST00000524638 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
GFI1B-205ENST00000524638 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
GFI1B-205ENST00000524638 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
GFI1B-205ENST00000524638 WDR97A6NE52 1622 aa20.27■□□□□ 0.83
GFI1B-205ENST00000524638 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
GFI1B-205ENST00000524638 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
GFI1B-205ENST00000524638 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
GFI1B-205ENST00000524638 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
GFI1B-205ENST00000524638 ADRA2BP18089 450 aa20.18■□□□□ 0.82
GFI1B-205ENST00000524638 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
GFI1B-205ENST00000524638 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
GFI1B-205ENST00000524638 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
GFI1B-205ENST00000524638 CHD1O14646 1710 aa20.15■□□□□ 0.82
GFI1B-205ENST00000524638 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
GFI1B-205ENST00000524638 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
GFI1B-205ENST00000524638 CLASP1Q7Z460 1538 aa20.1■□□□□ 0.81
GFI1B-205ENST00000524638 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
GFI1B-205ENST00000524638 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
GFI1B-205ENST00000524638 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
GFI1B-205ENST00000524638 TOP2BQ02880 1626 aa20■□□□□ 0.79
GFI1B-205ENST00000524638 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
GFI1B-205ENST00000524638 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
GFI1B-205ENST00000524638 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
GFI1B-205ENST00000524638 NUP160Q12769 1436 aa19.93■□□□□ 0.78
GFI1B-205ENST00000524638 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
GFI1B-205ENST00000524638 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms