RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
NUP98-213ENST00000524563 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
NUP98-213ENST00000524563 ABCC9O60706 1549 aa14.71□□□□□ -0.06
NUP98-213ENST00000524563 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
NUP98-213ENST00000524563 NACADO15069 1562 aa13.87□□□□□ -0.19
NUP98-213ENST00000524563 UNC13AQ9UPW8 1703 aa13.83□□□□□ -0.2
NUP98-213ENST00000524563 DCAF8L2P0C7V8 631 aa13.72□□□□□ -0.21
NUP98-213ENST00000524563 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
NUP98-213ENST00000524563 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP98-213ENST00000524563 MYO15BQ96JP2 1530 aa13.57□□□□□ -0.24
NUP98-213ENST00000524563 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
NUP98-213ENST00000524563 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
NUP98-213ENST00000524563 SCRIBQ14160 1630 aa13.46□□□□□ -0.26
NUP98-213ENST00000524563 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
NUP98-213ENST00000524563 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
NUP98-213ENST00000524563 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
NUP98-213ENST00000524563 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
NUP98-213ENST00000524563 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
NUP98-213ENST00000524563 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
NUP98-213ENST00000524563 SMARCA4P51532 1647 aa12.77□□□□□ -0.36
NUP98-213ENST00000524563 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
NUP98-213ENST00000524563 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
NUP98-213ENST00000524563 CUX2O14529 1486 aa12.71□□□□□ -0.38
NUP98-213ENST00000524563 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
NUP98-213ENST00000524563 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
NUP98-213ENST00000524563 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
NUP98-213ENST00000524563 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
NUP98-213ENST00000524563 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
NUP98-213ENST00000524563 NESP48681 1621 aa12.59□□□□□ -0.39
NUP98-213ENST00000524563 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
NUP98-213ENST00000524563 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
NUP98-213ENST00000524563 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
NUP98-213ENST00000524563 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
NUP98-213ENST00000524563 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
NUP98-213ENST00000524563 WIZO95785 1651 aa12.45□□□□□ -0.42
NUP98-213ENST00000524563 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
NUP98-213ENST00000524563 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
NUP98-213ENST00000524563 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
NUP98-213ENST00000524563 WDR62O43379 1518 aa12.33□□□□□ -0.44
NUP98-213ENST00000524563 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
NUP98-213ENST00000524563 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
NUP98-213ENST00000524563 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.44
NUP98-213ENST00000524563 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
NUP98-213ENST00000524563 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
NUP98-213ENST00000524563 CFTRP13569 1480 aa12.17□□□□□ -0.46
NUP98-213ENST00000524563 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
NUP98-213ENST00000524563 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
NUP98-213ENST00000524563 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
NUP98-213ENST00000524563 CHD1O14646 1710 aa12.06□□□□□ -0.48
NUP98-213ENST00000524563 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
NUP98-213ENST00000524563 DNMBPQ6XZF7 1577 aa12.03□□□□□ -0.48
NUP98-213ENST00000524563 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
NUP98-213ENST00000524563 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
NUP98-213ENST00000524563 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
NUP98-213ENST00000524563 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.48
NUP98-213ENST00000524563 TOPBP1Q92547 1522 aa12.02□□□□□ -0.48
NUP98-213ENST00000524563 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
NUP98-213ENST00000524563 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
NUP98-213ENST00000524563 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
NUP98-213ENST00000524563 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
NUP98-213ENST00000524563 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
NUP98-213ENST00000524563 AEBP2Q6ZN18 517 aaPredicted RBP11.92□□□□□ -0.5
NUP98-213ENST00000524563 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
NUP98-213ENST00000524563 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
NUP98-213ENST00000524563 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
NUP98-213ENST00000524563 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.513e-6■■■■□ 23.2
NUP98-213ENST00000524563 CHIC1Q5VXU3 224 aa11.84□□□□□ -0.51
NUP98-213ENST00000524563 FBLN2P98095 1184 aa11.83□□□□□ -0.52
NUP98-213ENST00000524563 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
NUP98-213ENST00000524563 SYNJ1O43426 1573 aa11.82□□□□□ -0.52
NUP98-213ENST00000524563 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
NUP98-213ENST00000524563 RAD54L2Q9Y4B4 1467 aa11.81□□□□□ -0.52
NUP98-213ENST00000524563 CUX1P39880 1505 aa11.79□□□□□ -0.52
NUP98-213ENST00000524563 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
NUP98-213ENST00000524563 SOGA1O94964 1423 aa11.77□□□□□ -0.52
NUP98-213ENST00000524563 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.52
NUP98-213ENST00000524563 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
NUP98-213ENST00000524563 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
NUP98-213ENST00000524563 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
NUP98-213ENST00000524563 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
NUP98-213ENST00000524563 ABCA5Q8WWZ7 1642 aa11.73□□□□□ -0.53
NUP98-213ENST00000524563 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
NUP98-213ENST00000524563 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
NUP98-213ENST00000524563 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
NUP98-213ENST00000524563 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
NUP98-213ENST00000524563 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
NUP98-213ENST00000524563 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
NUP98-213ENST00000524563 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
NUP98-213ENST00000524563 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.54
NUP98-213ENST00000524563 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
NUP98-213ENST00000524563 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
NUP98-213ENST00000524563 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
NUP98-213ENST00000524563 CEP170Q5SW79 1584 aa11.58□□□□□ -0.55
NUP98-213ENST00000524563 ERCC6L2Q5T890 1561 aa11.55□□□□□ -0.56
NUP98-213ENST00000524563 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
NUP98-213ENST00000524563 ERICH3Q5RHP9 1530 aa11.54□□□□□ -0.56
NUP98-213ENST00000524563 KIF13AQ9H1H9 1805 aa11.53□□□□□ -0.56
NUP98-213ENST00000524563 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
NUP98-213ENST00000524563 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
NUP98-213ENST00000524563 NUP160Q12769 1436 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms