RNA–Protein interactions for RNA: ENST00000524172.5

RMDN1-219, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 5

Gene RMDN1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-219ENST00000524172 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
RMDN1-219ENST00000524172 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
RMDN1-219ENST00000524172 ABCC9O60706 1549 aa19.69■□□□□ 0.74
RMDN1-219ENST00000524172 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
RMDN1-219ENST00000524172 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
RMDN1-219ENST00000524172 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
RMDN1-219ENST00000524172 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
RMDN1-219ENST00000524172 NACADO15069 1562 aa18.37■□□□□ 0.53
RMDN1-219ENST00000524172 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
RMDN1-219ENST00000524172 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
RMDN1-219ENST00000524172 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
RMDN1-219ENST00000524172 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
RMDN1-219ENST00000524172 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.46
RMDN1-219ENST00000524172 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
RMDN1-219ENST00000524172 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
RMDN1-219ENST00000524172 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
RMDN1-219ENST00000524172 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
RMDN1-219ENST00000524172 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.41
RMDN1-219ENST00000524172 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
RMDN1-219ENST00000524172 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
RMDN1-219ENST00000524172 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
RMDN1-219ENST00000524172 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
RMDN1-219ENST00000524172 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
RMDN1-219ENST00000524172 CUX2O14529 1486 aa17.15■□□□□ 0.34
RMDN1-219ENST00000524172 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
RMDN1-219ENST00000524172 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
RMDN1-219ENST00000524172 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
RMDN1-219ENST00000524172 SMARCA2P51531 1590 aa16.8■□□□□ 0.28
RMDN1-219ENST00000524172 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
RMDN1-219ENST00000524172 NESP48681 1621 aa16.76■□□□□ 0.27
RMDN1-219ENST00000524172 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
RMDN1-219ENST00000524172 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
RMDN1-219ENST00000524172 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
RMDN1-219ENST00000524172 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
RMDN1-219ENST00000524172 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
RMDN1-219ENST00000524172 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
RMDN1-219ENST00000524172 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
RMDN1-219ENST00000524172 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
RMDN1-219ENST00000524172 PEG3Q9GZU2 1588 aa16.52■□□□□ 0.24
RMDN1-219ENST00000524172 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
RMDN1-219ENST00000524172 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
RMDN1-219ENST00000524172 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
RMDN1-219ENST00000524172 WDR62O43379 1518 aa16.37■□□□□ 0.21
RMDN1-219ENST00000524172 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
RMDN1-219ENST00000524172 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
RMDN1-219ENST00000524172 FOXD1Q16676 465 aa16.27■□□□□ 0.2
RMDN1-219ENST00000524172 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
RMDN1-219ENST00000524172 WIZO95785 1651 aa16.18■□□□□ 0.18
RMDN1-219ENST00000524172 CFTRP13569 1480 aa16.14■□□□□ 0.17
RMDN1-219ENST00000524172 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.17
RMDN1-219ENST00000524172 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.17
RMDN1-219ENST00000524172 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.17
RMDN1-219ENST00000524172 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
RMDN1-219ENST00000524172 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
RMDN1-219ENST00000524172 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
RMDN1-219ENST00000524172 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
RMDN1-219ENST00000524172 IFT140Q96RY7 1462 aa16■□□□□ 0.15
RMDN1-219ENST00000524172 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
RMDN1-219ENST00000524172 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
RMDN1-219ENST00000524172 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
RMDN1-219ENST00000524172 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
RMDN1-219ENST00000524172 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
RMDN1-219ENST00000524172 FBLN2P98095 1184 aa15.88■□□□□ 0.13
RMDN1-219ENST00000524172 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
RMDN1-219ENST00000524172 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
RMDN1-219ENST00000524172 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
RMDN1-219ENST00000524172 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
RMDN1-219ENST00000524172 CHD1O14646 1710 aa15.8■□□□□ 0.12
RMDN1-219ENST00000524172 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
RMDN1-219ENST00000524172 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
RMDN1-219ENST00000524172 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
RMDN1-219ENST00000524172 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
RMDN1-219ENST00000524172 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
RMDN1-219ENST00000524172 SOGA1O94964 1423 aa15.66■□□□□ 0.1
RMDN1-219ENST00000524172 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
RMDN1-219ENST00000524172 SYNJ1O43426 1573 aa15.63■□□□□ 0.09
RMDN1-219ENST00000524172 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
RMDN1-219ENST00000524172 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
RMDN1-219ENST00000524172 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
RMDN1-219ENST00000524172 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
RMDN1-219ENST00000524172 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
RMDN1-219ENST00000524172 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
RMDN1-219ENST00000524172 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
RMDN1-219ENST00000524172 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
RMDN1-219ENST00000524172 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
RMDN1-219ENST00000524172 CUX1P39880 1505 aa15.43■□□□□ 0.06
RMDN1-219ENST00000524172 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
RMDN1-219ENST00000524172 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
RMDN1-219ENST00000524172 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.05
RMDN1-219ENST00000524172 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
RMDN1-219ENST00000524172 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
RMDN1-219ENST00000524172 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
RMDN1-219ENST00000524172 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
RMDN1-219ENST00000524172 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
RMDN1-219ENST00000524172 NUP160Q12769 1436 aa15.26■□□□□ 0.03
RMDN1-219ENST00000524172 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
RMDN1-219ENST00000524172 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
RMDN1-219ENST00000524172 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
RMDN1-219ENST00000524172 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
RMDN1-219ENST00000524172 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms