RNA–Protein interactions for RNA: ENST00000524122.5

SFTA3-209, Transcript of surfactant associated 3, humanhuman

TSL 3

Gene SFTA3, Length 694 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3-209ENST00000524122 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
SFTA3-209ENST00000524122 ABCC9O60706 1549 aa26.51■■□□□ 1.83
SFTA3-209ENST00000524122 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
SFTA3-209ENST00000524122 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
SFTA3-209ENST00000524122 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
SFTA3-209ENST00000524122 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
SFTA3-209ENST00000524122 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
SFTA3-209ENST00000524122 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
SFTA3-209ENST00000524122 NACADO15069 1562 aa24.29■■□□□ 1.48
SFTA3-209ENST00000524122 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
SFTA3-209ENST00000524122 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
SFTA3-209ENST00000524122 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
SFTA3-209ENST00000524122 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.43
SFTA3-209ENST00000524122 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
SFTA3-209ENST00000524122 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
SFTA3-209ENST00000524122 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
SFTA3-209ENST00000524122 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
SFTA3-209ENST00000524122 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
SFTA3-209ENST00000524122 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
SFTA3-209ENST00000524122 CUX2O14529 1486 aa23.19■■□□□ 1.3
SFTA3-209ENST00000524122 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
SFTA3-209ENST00000524122 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
SFTA3-209ENST00000524122 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
SFTA3-209ENST00000524122 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
SFTA3-209ENST00000524122 NESP48681 1621 aa22.44■■□□□ 1.18
SFTA3-209ENST00000524122 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
SFTA3-209ENST00000524122 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
SFTA3-209ENST00000524122 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
SFTA3-209ENST00000524122 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
SFTA3-209ENST00000524122 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
SFTA3-209ENST00000524122 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
SFTA3-209ENST00000524122 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
SFTA3-209ENST00000524122 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
SFTA3-209ENST00000524122 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
SFTA3-209ENST00000524122 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
SFTA3-209ENST00000524122 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SFTA3-209ENST00000524122 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
SFTA3-209ENST00000524122 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
SFTA3-209ENST00000524122 WDR62O43379 1518 aa21.84■■□□□ 1.09
SFTA3-209ENST00000524122 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
SFTA3-209ENST00000524122 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
SFTA3-209ENST00000524122 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
SFTA3-209ENST00000524122 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
SFTA3-209ENST00000524122 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
SFTA3-209ENST00000524122 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
SFTA3-209ENST00000524122 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
SFTA3-209ENST00000524122 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
SFTA3-209ENST00000524122 ARHGEF11O15085 1522 aa21.63■■□□□ 1.05
SFTA3-209ENST00000524122 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
SFTA3-209ENST00000524122 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
SFTA3-209ENST00000524122 URB2Q14146 1524 aaKnown RBP21.35■■□□□ 1.01
SFTA3-209ENST00000524122 ARAP1Q96P48 1450 aa21.33■■□□□ 1.01
SFTA3-209ENST00000524122 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
SFTA3-209ENST00000524122 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
SFTA3-209ENST00000524122 CFTRP13569 1480 aa21.25■□□□□ 0.99
SFTA3-209ENST00000524122 FBLN2P98095 1184 aa21.24■□□□□ 0.99
SFTA3-209ENST00000524122 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
SFTA3-209ENST00000524122 WIZO95785 1651 aa21.2■□□□□ 0.98
SFTA3-209ENST00000524122 CHD1O14646 1710 aa21.16■□□□□ 0.98
SFTA3-209ENST00000524122 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
SFTA3-209ENST00000524122 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
SFTA3-209ENST00000524122 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
SFTA3-209ENST00000524122 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
SFTA3-209ENST00000524122 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
SFTA3-209ENST00000524122 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
SFTA3-209ENST00000524122 PRDM2Q13029 1718 aa20.96■□□□□ 0.95
SFTA3-209ENST00000524122 ABCC8Q09428 1581 aa20.89■□□□□ 0.94
SFTA3-209ENST00000524122 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
SFTA3-209ENST00000524122 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
SFTA3-209ENST00000524122 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.92
SFTA3-209ENST00000524122 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
SFTA3-209ENST00000524122 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
SFTA3-209ENST00000524122 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
SFTA3-209ENST00000524122 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
SFTA3-209ENST00000524122 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
SFTA3-209ENST00000524122 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
SFTA3-209ENST00000524122 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
SFTA3-209ENST00000524122 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
SFTA3-209ENST00000524122 SOGA1O94964 1423 aa20.64■□□□□ 0.89
SFTA3-209ENST00000524122 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
SFTA3-209ENST00000524122 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
SFTA3-209ENST00000524122 SYNJ2O15056 1496 aa20.58■□□□□ 0.89
SFTA3-209ENST00000524122 KDM4FA0A1W2PPD8 638 aa20.58■□□□□ 0.89
SFTA3-209ENST00000524122 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
SFTA3-209ENST00000524122 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
SFTA3-209ENST00000524122 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
SFTA3-209ENST00000524122 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
SFTA3-209ENST00000524122 FAM69CQ0P6D2 419 aa20.46■□□□□ 0.87
SFTA3-209ENST00000524122 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
SFTA3-209ENST00000524122 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
SFTA3-209ENST00000524122 KDM6BO15054 1643 aa20.38■□□□□ 0.85
SFTA3-209ENST00000524122 NPM1P06748 294 aaKnown RBP eCLIP20.36■□□□□ 0.85
SFTA3-209ENST00000524122 CEP170Q5SW79 1584 aa20.35■□□□□ 0.85
SFTA3-209ENST00000524122 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
SFTA3-209ENST00000524122 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
SFTA3-209ENST00000524122 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
SFTA3-209ENST00000524122 HECW2Q9P2P5 1572 aa20.23■□□□□ 0.83
SFTA3-209ENST00000524122 CUX1P39880 1505 aa20.22■□□□□ 0.83
SFTA3-209ENST00000524122 FBXO41Q8TF61 875 aa20.21■□□□□ 0.83
SFTA3-209ENST00000524122 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms