RNA–Protein interactions for RNA: ENST00000524112.1

CSGALNACT1-215, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-215ENST00000524112 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
CSGALNACT1-215ENST00000524112 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
CSGALNACT1-215ENST00000524112 ABCC9O60706 1549 aa20.5■□□□□ 0.87
CSGALNACT1-215ENST00000524112 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
CSGALNACT1-215ENST00000524112 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
CSGALNACT1-215ENST00000524112 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
CSGALNACT1-215ENST00000524112 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
CSGALNACT1-215ENST00000524112 NACADO15069 1562 aa19.36■□□□□ 0.69
CSGALNACT1-215ENST00000524112 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
CSGALNACT1-215ENST00000524112 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
CSGALNACT1-215ENST00000524112 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
CSGALNACT1-215ENST00000524112 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
CSGALNACT1-215ENST00000524112 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
CSGALNACT1-215ENST00000524112 DNAJC5Q9H3Z4 198 aa18.74■□□□□ 0.59
CSGALNACT1-215ENST00000524112 CECR2Q9BXF3 1484 aa18.68■□□□□ 0.58
CSGALNACT1-215ENST00000524112 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
CSGALNACT1-215ENST00000524112 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
CSGALNACT1-215ENST00000524112 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
CSGALNACT1-215ENST00000524112 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
CSGALNACT1-215ENST00000524112 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
CSGALNACT1-215ENST00000524112 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
CSGALNACT1-215ENST00000524112 CUX2O14529 1486 aa18.26■□□□□ 0.51
CSGALNACT1-215ENST00000524112 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
CSGALNACT1-215ENST00000524112 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
CSGALNACT1-215ENST00000524112 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
CSGALNACT1-215ENST00000524112 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
CSGALNACT1-215ENST00000524112 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
CSGALNACT1-215ENST00000524112 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
CSGALNACT1-215ENST00000524112 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
CSGALNACT1-215ENST00000524112 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
CSGALNACT1-215ENST00000524112 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
CSGALNACT1-215ENST00000524112 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.39
CSGALNACT1-215ENST00000524112 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
CSGALNACT1-215ENST00000524112 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
CSGALNACT1-215ENST00000524112 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
CSGALNACT1-215ENST00000524112 NESP48681 1621 aa17.39■□□□□ 0.38
CSGALNACT1-215ENST00000524112 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
CSGALNACT1-215ENST00000524112 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
CSGALNACT1-215ENST00000524112 KIF21AQ7Z4S6 1674 aa17.27■□□□□ 0.36
CSGALNACT1-215ENST00000524112 WDR62O43379 1518 aa17.25■□□□□ 0.35
CSGALNACT1-215ENST00000524112 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
CSGALNACT1-215ENST00000524112 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
CSGALNACT1-215ENST00000524112 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
CSGALNACT1-215ENST00000524112 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
CSGALNACT1-215ENST00000524112 FOXD1Q16676 465 aa17.06■□□□□ 0.32
CSGALNACT1-215ENST00000524112 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
CSGALNACT1-215ENST00000524112 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
CSGALNACT1-215ENST00000524112 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
CSGALNACT1-215ENST00000524112 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
CSGALNACT1-215ENST00000524112 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
CSGALNACT1-215ENST00000524112 CFTRP13569 1480 aa16.9■□□□□ 0.3
CSGALNACT1-215ENST00000524112 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
CSGALNACT1-215ENST00000524112 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
CSGALNACT1-215ENST00000524112 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
CSGALNACT1-215ENST00000524112 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
CSGALNACT1-215ENST00000524112 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
CSGALNACT1-215ENST00000524112 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
CSGALNACT1-215ENST00000524112 WIZO95785 1651 aa16.67■□□□□ 0.26
CSGALNACT1-215ENST00000524112 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
CSGALNACT1-215ENST00000524112 CYB5RLQ6IPT4 315 aa16.65■□□□□ 0.26
CSGALNACT1-215ENST00000524112 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-215ENST00000524112 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
CSGALNACT1-215ENST00000524112 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
CSGALNACT1-215ENST00000524112 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
CSGALNACT1-215ENST00000524112 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
CSGALNACT1-215ENST00000524112 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
CSGALNACT1-215ENST00000524112 CHD1O14646 1710 aa16.52■□□□□ 0.24
CSGALNACT1-215ENST00000524112 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
CSGALNACT1-215ENST00000524112 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
CSGALNACT1-215ENST00000524112 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
CSGALNACT1-215ENST00000524112 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
CSGALNACT1-215ENST00000524112 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
CSGALNACT1-215ENST00000524112 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
CSGALNACT1-215ENST00000524112 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
CSGALNACT1-215ENST00000524112 FBLN2P98095 1184 aa16.34■□□□□ 0.21
CSGALNACT1-215ENST00000524112 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
CSGALNACT1-215ENST00000524112 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
CSGALNACT1-215ENST00000524112 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
CSGALNACT1-215ENST00000524112 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
CSGALNACT1-215ENST00000524112 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
CSGALNACT1-215ENST00000524112 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
CSGALNACT1-215ENST00000524112 SOGA1O94964 1423 aa16.25■□□□□ 0.19
CSGALNACT1-215ENST00000524112 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
CSGALNACT1-215ENST00000524112 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
CSGALNACT1-215ENST00000524112 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
CSGALNACT1-215ENST00000524112 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
CSGALNACT1-215ENST00000524112 MSH5O43196 834 aa16.11■□□□□ 0.17
CSGALNACT1-215ENST00000524112 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
CSGALNACT1-215ENST00000524112 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
CSGALNACT1-215ENST00000524112 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
CSGALNACT1-215ENST00000524112 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
CSGALNACT1-215ENST00000524112 SHROOM2Q13796 1616 aa16.02■□□□□ 0.16
CSGALNACT1-215ENST00000524112 NUP160Q12769 1436 aa16.02■□□□□ 0.15
CSGALNACT1-215ENST00000524112 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
CSGALNACT1-215ENST00000524112 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CSGALNACT1-215ENST00000524112 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
CSGALNACT1-215ENST00000524112 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
CSGALNACT1-215ENST00000524112 MAPKBP1O60336 1514 aa15.98■□□□□ 0.15
CSGALNACT1-215ENST00000524112 CUX1P39880 1505 aa15.98■□□□□ 0.15
CSGALNACT1-215ENST00000524112 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms