RNA–Protein interactions for RNA: ENST00000524089.1

CDH15-203, Transcript of cadherin 15, humanhuman

TSL 2

Gene CDH15, Length 1,587 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-203ENST00000524089 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
CDH15-203ENST00000524089 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
CDH15-203ENST00000524089 ABCC9O60706 1549 aa32.14■■■□□ 2.73
CDH15-203ENST00000524089 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
CDH15-203ENST00000524089 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
CDH15-203ENST00000524089 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.64
CDH15-203ENST00000524089 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
CDH15-203ENST00000524089 NACADO15069 1562 aa31.42■■■□□ 2.62
CDH15-203ENST00000524089 RB1CC1Q8TDY2 1594 aa31.29■■■□□ 2.6
CDH15-203ENST00000524089 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
CDH15-203ENST00000524089 UNC13AQ9UPW8 1703 aa30.77■■■□□ 2.52
CDH15-203ENST00000524089 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
CDH15-203ENST00000524089 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
CDH15-203ENST00000524089 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.41
CDH15-203ENST00000524089 CECR2Q9BXF3 1484 aa29.64■■■□□ 2.34
CDH15-203ENST00000524089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
CDH15-203ENST00000524089 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
CDH15-203ENST00000524089 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
CDH15-203ENST00000524089 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
CDH15-203ENST00000524089 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
CDH15-203ENST00000524089 WIZO95785 1651 aa29.25■■■□□ 2.27
CDH15-203ENST00000524089 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
CDH15-203ENST00000524089 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
CDH15-203ENST00000524089 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
CDH15-203ENST00000524089 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
CDH15-203ENST00000524089 ATAD2BQ9ULI0 1458 aa29.08■■■□□ 2.25
CDH15-203ENST00000524089 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
CDH15-203ENST00000524089 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
CDH15-203ENST00000524089 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
CDH15-203ENST00000524089 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
CDH15-203ENST00000524089 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
CDH15-203ENST00000524089 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
CDH15-203ENST00000524089 PRDM2Q13029 1718 aa28.22■■■□□ 2.11
CDH15-203ENST00000524089 CFTRP13569 1480 aa28.14■■■□□ 2.09
CDH15-203ENST00000524089 LAMC3Q9Y6N6 1575 aa28.12■■■□□ 2.09
CDH15-203ENST00000524089 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
CDH15-203ENST00000524089 NESP48681 1621 aa28.06■■■□□ 2.08
CDH15-203ENST00000524089 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
CDH15-203ENST00000524089 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
CDH15-203ENST00000524089 PDS5BQ9NTI5 1447 aa27.82■■■□□ 2.04
CDH15-203ENST00000524089 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
CDH15-203ENST00000524089 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
CDH15-203ENST00000524089 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
CDH15-203ENST00000524089 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
CDH15-203ENST00000524089 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
CDH15-203ENST00000524089 SYNJ1O43426 1573 aa27.63■■■□□ 2.01
CDH15-203ENST00000524089 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
CDH15-203ENST00000524089 CUX1P39880 1505 aa27.59■■■□□ 2.01
CDH15-203ENST00000524089 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
CDH15-203ENST00000524089 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
CDH15-203ENST00000524089 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
CDH15-203ENST00000524089 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
CDH15-203ENST00000524089 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
CDH15-203ENST00000524089 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
CDH15-203ENST00000524089 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
CDH15-203ENST00000524089 WDR62O43379 1518 aa27.44■■□□□ 1.98
CDH15-203ENST00000524089 FGD5Q6ZNL6 1462 aa27.37■■□□□ 1.97
CDH15-203ENST00000524089 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
CDH15-203ENST00000524089 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
CDH15-203ENST00000524089 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
CDH15-203ENST00000524089 CUX2O14529 1486 aa27.17■■□□□ 1.94
CDH15-203ENST00000524089 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
CDH15-203ENST00000524089 SOGA1O94964 1423 aa27.17■■□□□ 1.94
CDH15-203ENST00000524089 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
CDH15-203ENST00000524089 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
CDH15-203ENST00000524089 RUSC2Q8N2Y8 1516 aa27.04■■□□□ 1.92
CDH15-203ENST00000524089 ABCA5Q8WWZ7 1642 aa27.02■■□□□ 1.92
CDH15-203ENST00000524089 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
CDH15-203ENST00000524089 EEA1Q15075 1411 aa27.01■■□□□ 1.91
CDH15-203ENST00000524089 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
CDH15-203ENST00000524089 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
CDH15-203ENST00000524089 EIF4G3O43432 1585 aaKnown RBP26.94■■□□□ 1.9
CDH15-203ENST00000524089 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
CDH15-203ENST00000524089 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
CDH15-203ENST00000524089 GAPVD1Q14C86 1478 aa26.9■■□□□ 1.9
CDH15-203ENST00000524089 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
CDH15-203ENST00000524089 ERICH3Q5RHP9 1530 aa26.83■■□□□ 1.89
CDH15-203ENST00000524089 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
CDH15-203ENST00000524089 CUL7Q14999 1698 aa26.8■■□□□ 1.88
CDH15-203ENST00000524089 GRIN2BQ13224 1484 aa26.78■■□□□ 1.88
CDH15-203ENST00000524089 IGF1RP08069 1367 aa26.77■■□□□ 1.88
CDH15-203ENST00000524089 KIF21BO75037 1637 aa26.76■■□□□ 1.87
CDH15-203ENST00000524089 ADAMTS12P58397 1594 aa26.7■■□□□ 1.86
CDH15-203ENST00000524089 PRXQ9BXM0 1461 aa26.7■■□□□ 1.86
CDH15-203ENST00000524089 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
CDH15-203ENST00000524089 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
CDH15-203ENST00000524089 CARMIL1Q5VZK9 1371 aa26.64■■□□□ 1.86
CDH15-203ENST00000524089 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
CDH15-203ENST00000524089 RAPGEF2Q9Y4G8 1499 aa26.6■■□□□ 1.85
CDH15-203ENST00000524089 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
CDH15-203ENST00000524089 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
CDH15-203ENST00000524089 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
CDH15-203ENST00000524089 CHD1O14646 1710 aa26.52■■□□□ 1.84
CDH15-203ENST00000524089 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
CDH15-203ENST00000524089 HRCP23327 699 aa26.51■■□□□ 1.83
CDH15-203ENST00000524089 CTTNBP2Q8WZ74 1663 aa26.48■■□□□ 1.83
CDH15-203ENST00000524089 GRIN2AQ12879 1464 aa26.46■■□□□ 1.83
CDH15-203ENST00000524089 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
CDH15-203ENST00000524089 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
CDH15-203ENST00000524089 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms