RNA–Protein interactions for RNA: ENST00000523650.5

ERGIC1-214, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3

Gene ERGIC1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-214ENST00000523650 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
ERGIC1-214ENST00000523650 ABCC9O60706 1549 aa16.39■□□□□ 0.21
ERGIC1-214ENST00000523650 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
ERGIC1-214ENST00000523650 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
ERGIC1-214ENST00000523650 NACADO15069 1562 aa15.46■□□□□ 0.07
ERGIC1-214ENST00000523650 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
ERGIC1-214ENST00000523650 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
ERGIC1-214ENST00000523650 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
ERGIC1-214ENST00000523650 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
ERGIC1-214ENST00000523650 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
ERGIC1-214ENST00000523650 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
ERGIC1-214ENST00000523650 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
ERGIC1-214ENST00000523650 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
ERGIC1-214ENST00000523650 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
ERGIC1-214ENST00000523650 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
ERGIC1-214ENST00000523650 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
ERGIC1-214ENST00000523650 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
ERGIC1-214ENST00000523650 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
ERGIC1-214ENST00000523650 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
ERGIC1-214ENST00000523650 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
ERGIC1-214ENST00000523650 CUX2O14529 1486 aa14.21□□□□□ -0.13
ERGIC1-214ENST00000523650 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
ERGIC1-214ENST00000523650 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
ERGIC1-214ENST00000523650 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
ERGIC1-214ENST00000523650 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
ERGIC1-214ENST00000523650 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
ERGIC1-214ENST00000523650 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
ERGIC1-214ENST00000523650 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
ERGIC1-214ENST00000523650 NESP48681 1621 aa14.06□□□□□ -0.16
ERGIC1-214ENST00000523650 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
ERGIC1-214ENST00000523650 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
ERGIC1-214ENST00000523650 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
ERGIC1-214ENST00000523650 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
ERGIC1-214ENST00000523650 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
ERGIC1-214ENST00000523650 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
ERGIC1-214ENST00000523650 WIZO95785 1651 aa13.8□□□□□ -0.2
ERGIC1-214ENST00000523650 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
ERGIC1-214ENST00000523650 WDR62O43379 1518 aa13.77□□□□□ -0.21
ERGIC1-214ENST00000523650 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
ERGIC1-214ENST00000523650 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
ERGIC1-214ENST00000523650 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
ERGIC1-214ENST00000523650 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
ERGIC1-214ENST00000523650 CFTRP13569 1480 aa13.64□□□□□ -0.23
ERGIC1-214ENST00000523650 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
ERGIC1-214ENST00000523650 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
ERGIC1-214ENST00000523650 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
ERGIC1-214ENST00000523650 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
ERGIC1-214ENST00000523650 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
ERGIC1-214ENST00000523650 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
ERGIC1-214ENST00000523650 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
ERGIC1-214ENST00000523650 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
ERGIC1-214ENST00000523650 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
ERGIC1-214ENST00000523650 ZNF608Q9ULD9 1512 aaPredicted RBP13.4□□□□□ -0.26
ERGIC1-214ENST00000523650 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
ERGIC1-214ENST00000523650 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
ERGIC1-214ENST00000523650 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
ERGIC1-214ENST00000523650 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
ERGIC1-214ENST00000523650 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
ERGIC1-214ENST00000523650 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
ERGIC1-214ENST00000523650 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
ERGIC1-214ENST00000523650 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
ERGIC1-214ENST00000523650 CHD1O14646 1710 aa13.3□□□□□ -0.28
ERGIC1-214ENST00000523650 POLA1P09884 1462 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-214ENST00000523650 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.299e-6■□□□□ 10.2
ERGIC1-214ENST00000523650 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
ERGIC1-214ENST00000523650 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
ERGIC1-214ENST00000523650 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
ERGIC1-214ENST00000523650 FGD5Q6ZNL6 1462 aa13.15□□□□□ -0.3
ERGIC1-214ENST00000523650 CUX1P39880 1505 aa13.14□□□□□ -0.31
ERGIC1-214ENST00000523650 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
ERGIC1-214ENST00000523650 SOGA1O94964 1423 aa13.13□□□□□ -0.31
ERGIC1-214ENST00000523650 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
ERGIC1-214ENST00000523650 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
ERGIC1-214ENST00000523650 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
ERGIC1-214ENST00000523650 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
ERGIC1-214ENST00000523650 FBLN2P98095 1184 aa13.1□□□□□ -0.31
ERGIC1-214ENST00000523650 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
ERGIC1-214ENST00000523650 PBRM1Q86U86 1689 aa13.08□□□□□ -0.31
ERGIC1-214ENST00000523650 GRIN2BQ13224 1484 aa13.08□□□□□ -0.32
ERGIC1-214ENST00000523650 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
ERGIC1-214ENST00000523650 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
ERGIC1-214ENST00000523650 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
ERGIC1-214ENST00000523650 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
ERGIC1-214ENST00000523650 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
ERGIC1-214ENST00000523650 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
ERGIC1-214ENST00000523650 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
ERGIC1-214ENST00000523650 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
ERGIC1-214ENST00000523650 CHIC1Q5VXU3 224 aa12.93□□□□□ -0.34
ERGIC1-214ENST00000523650 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
ERGIC1-214ENST00000523650 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
ERGIC1-214ENST00000523650 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
ERGIC1-214ENST00000523650 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
ERGIC1-214ENST00000523650 NUP160Q12769 1436 aa12.89□□□□□ -0.35
ERGIC1-214ENST00000523650 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
ERGIC1-214ENST00000523650 SHROOM2Q13796 1616 aa12.88□□□□□ -0.35
ERGIC1-214ENST00000523650 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
ERGIC1-214ENST00000523650 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
ERGIC1-214ENST00000523650 EEA1Q15075 1411 aa12.79□□□□□ -0.36
ERGIC1-214ENST00000523650 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
ERGIC1-214ENST00000523650 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms