RNA–Protein interactions for RNA: ENST00000523616.1

PNMA2-208, Transcript of PNMA family member 2, humanhuman

TSL 4

Gene PNMA2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA2-208ENST00000523616 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
PNMA2-208ENST00000523616 ABCC9O60706 1549 aa22.28■■□□□ 1.16
PNMA2-208ENST00000523616 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
PNMA2-208ENST00000523616 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
PNMA2-208ENST00000523616 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
PNMA2-208ENST00000523616 NACADO15069 1562 aa20.9■□□□□ 0.94
PNMA2-208ENST00000523616 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
PNMA2-208ENST00000523616 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
PNMA2-208ENST00000523616 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
PNMA2-208ENST00000523616 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
PNMA2-208ENST00000523616 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
PNMA2-208ENST00000523616 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
PNMA2-208ENST00000523616 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
PNMA2-208ENST00000523616 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
PNMA2-208ENST00000523616 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
PNMA2-208ENST00000523616 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
PNMA2-208ENST00000523616 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
PNMA2-208ENST00000523616 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
PNMA2-208ENST00000523616 AEBP2Q6ZN18 517 aaPredicted RBP19.63■□□□□ 0.73
PNMA2-208ENST00000523616 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
PNMA2-208ENST00000523616 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
PNMA2-208ENST00000523616 CUX2O14529 1486 aa19.28■□□□□ 0.68
PNMA2-208ENST00000523616 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
PNMA2-208ENST00000523616 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
PNMA2-208ENST00000523616 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
PNMA2-208ENST00000523616 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
PNMA2-208ENST00000523616 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
PNMA2-208ENST00000523616 NESP48681 1621 aa19.06■□□□□ 0.64
PNMA2-208ENST00000523616 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
PNMA2-208ENST00000523616 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
PNMA2-208ENST00000523616 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
PNMA2-208ENST00000523616 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
PNMA2-208ENST00000523616 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
PNMA2-208ENST00000523616 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
PNMA2-208ENST00000523616 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
PNMA2-208ENST00000523616 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
PNMA2-208ENST00000523616 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
PNMA2-208ENST00000523616 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
PNMA2-208ENST00000523616 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
PNMA2-208ENST00000523616 WIZO95785 1651 aa18.6■□□□□ 0.57
PNMA2-208ENST00000523616 WDR62O43379 1518 aa18.6■□□□□ 0.57
PNMA2-208ENST00000523616 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
PNMA2-208ENST00000523616 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
PNMA2-208ENST00000523616 CFTRP13569 1480 aa18.46■□□□□ 0.54
PNMA2-208ENST00000523616 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
PNMA2-208ENST00000523616 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
PNMA2-208ENST00000523616 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
PNMA2-208ENST00000523616 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
PNMA2-208ENST00000523616 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
PNMA2-208ENST00000523616 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
PNMA2-208ENST00000523616 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
PNMA2-208ENST00000523616 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
PNMA2-208ENST00000523616 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
PNMA2-208ENST00000523616 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
PNMA2-208ENST00000523616 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
PNMA2-208ENST00000523616 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
PNMA2-208ENST00000523616 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
PNMA2-208ENST00000523616 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
PNMA2-208ENST00000523616 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
PNMA2-208ENST00000523616 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
PNMA2-208ENST00000523616 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
PNMA2-208ENST00000523616 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
PNMA2-208ENST00000523616 AQRO60306 1485 aaKnown RBP eCLIP17.99■□□□□ 0.47
PNMA2-208ENST00000523616 FBLN2P98095 1184 aa17.96■□□□□ 0.47
PNMA2-208ENST00000523616 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
PNMA2-208ENST00000523616 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
PNMA2-208ENST00000523616 CHD1O14646 1710 aa17.92■□□□□ 0.46
PNMA2-208ENST00000523616 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
PNMA2-208ENST00000523616 SOGA1O94964 1423 aa17.87■□□□□ 0.45
PNMA2-208ENST00000523616 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
PNMA2-208ENST00000523616 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
PNMA2-208ENST00000523616 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
PNMA2-208ENST00000523616 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
PNMA2-208ENST00000523616 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
PNMA2-208ENST00000523616 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
PNMA2-208ENST00000523616 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
PNMA2-208ENST00000523616 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
PNMA2-208ENST00000523616 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
PNMA2-208ENST00000523616 GRIN2BQ13224 1484 aa17.73■□□□□ 0.43
PNMA2-208ENST00000523616 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
PNMA2-208ENST00000523616 CUX1P39880 1505 aa17.72■□□□□ 0.43
PNMA2-208ENST00000523616 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
PNMA2-208ENST00000523616 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
PNMA2-208ENST00000523616 PBRM1Q86U86 1689 aa17.58■□□□□ 0.41
PNMA2-208ENST00000523616 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
PNMA2-208ENST00000523616 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
PNMA2-208ENST00000523616 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
PNMA2-208ENST00000523616 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
PNMA2-208ENST00000523616 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
PNMA2-208ENST00000523616 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
PNMA2-208ENST00000523616 NUP160Q12769 1436 aa17.43■□□□□ 0.38
PNMA2-208ENST00000523616 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
PNMA2-208ENST00000523616 CEP170Q5SW79 1584 aa17.41■□□□□ 0.38
PNMA2-208ENST00000523616 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
PNMA2-208ENST00000523616 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
PNMA2-208ENST00000523616 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
PNMA2-208ENST00000523616 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
PNMA2-208ENST00000523616 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
PNMA2-208ENST00000523616 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
PNMA2-208ENST00000523616 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms