RNA–Protein interactions for RNA: ENST00000523487.1

RNF130-208, Transcript of ring finger protein 130, humanhuman

TSL 3

Gene RNF130, Length 697 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-208ENST00000523487 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
RNF130-208ENST00000523487 ABCC9O60706 1549 aa21.3■■□□□ 1
RNF130-208ENST00000523487 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
RNF130-208ENST00000523487 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
RNF130-208ENST00000523487 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
RNF130-208ENST00000523487 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
RNF130-208ENST00000523487 NACADO15069 1562 aa20.17■□□□□ 0.82
RNF130-208ENST00000523487 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
RNF130-208ENST00000523487 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
RNF130-208ENST00000523487 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
RNF130-208ENST00000523487 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
RNF130-208ENST00000523487 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
RNF130-208ENST00000523487 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
RNF130-208ENST00000523487 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
RNF130-208ENST00000523487 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
RNF130-208ENST00000523487 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
RNF130-208ENST00000523487 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
RNF130-208ENST00000523487 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
RNF130-208ENST00000523487 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
RNF130-208ENST00000523487 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
RNF130-208ENST00000523487 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
RNF130-208ENST00000523487 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
RNF130-208ENST00000523487 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
RNF130-208ENST00000523487 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
RNF130-208ENST00000523487 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
RNF130-208ENST00000523487 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
RNF130-208ENST00000523487 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
RNF130-208ENST00000523487 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
RNF130-208ENST00000523487 CUX2O14529 1486 aa18.4■□□□□ 0.54
RNF130-208ENST00000523487 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
RNF130-208ENST00000523487 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
RNF130-208ENST00000523487 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
RNF130-208ENST00000523487 NESP48681 1621 aa18.27■□□□□ 0.52
RNF130-208ENST00000523487 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
RNF130-208ENST00000523487 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
RNF130-208ENST00000523487 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
RNF130-208ENST00000523487 WIZO95785 1651 aa18.03■□□□□ 0.48
RNF130-208ENST00000523487 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
RNF130-208ENST00000523487 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
RNF130-208ENST00000523487 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
RNF130-208ENST00000523487 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
RNF130-208ENST00000523487 CFTRP13569 1480 aa17.87■□□□□ 0.45
RNF130-208ENST00000523487 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
RNF130-208ENST00000523487 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
RNF130-208ENST00000523487 WDR62O43379 1518 aa17.84■□□□□ 0.45
RNF130-208ENST00000523487 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
RNF130-208ENST00000523487 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
RNF130-208ENST00000523487 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
RNF130-208ENST00000523487 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
RNF130-208ENST00000523487 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
RNF130-208ENST00000523487 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
RNF130-208ENST00000523487 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
RNF130-208ENST00000523487 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
RNF130-208ENST00000523487 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
RNF130-208ENST00000523487 ZNF608Q9ULD9 1512 aaPredicted RBP17.45■□□□□ 0.38
RNF130-208ENST00000523487 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
RNF130-208ENST00000523487 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
RNF130-208ENST00000523487 FBLN2P98095 1184 aa17.33■□□□□ 0.36
RNF130-208ENST00000523487 SOGA1O94964 1423 aa17.32■□□□□ 0.36
RNF130-208ENST00000523487 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
RNF130-208ENST00000523487 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
RNF130-208ENST00000523487 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
RNF130-208ENST00000523487 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
RNF130-208ENST00000523487 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
RNF130-208ENST00000523487 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
RNF130-208ENST00000523487 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
RNF130-208ENST00000523487 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
RNF130-208ENST00000523487 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
RNF130-208ENST00000523487 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
RNF130-208ENST00000523487 ARHGEF11O15085 1522 aa17.23■□□□□ 0.35
RNF130-208ENST00000523487 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
RNF130-208ENST00000523487 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
RNF130-208ENST00000523487 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
RNF130-208ENST00000523487 CUX1P39880 1505 aa17.16■□□□□ 0.34
RNF130-208ENST00000523487 CHD1O14646 1710 aa17.13■□□□□ 0.33
RNF130-208ENST00000523487 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
RNF130-208ENST00000523487 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
RNF130-208ENST00000523487 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
RNF130-208ENST00000523487 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.32
RNF130-208ENST00000523487 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
RNF130-208ENST00000523487 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
RNF130-208ENST00000523487 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
RNF130-208ENST00000523487 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
RNF130-208ENST00000523487 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
RNF130-208ENST00000523487 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
RNF130-208ENST00000523487 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
RNF130-208ENST00000523487 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
RNF130-208ENST00000523487 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
RNF130-208ENST00000523487 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
RNF130-208ENST00000523487 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
RNF130-208ENST00000523487 TOP2BQ02880 1626 aa16.91■□□□□ 0.3
RNF130-208ENST00000523487 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
RNF130-208ENST00000523487 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
RNF130-208ENST00000523487 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
RNF130-208ENST00000523487 NUP160Q12769 1436 aa16.83■□□□□ 0.28
RNF130-208ENST00000523487 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
RNF130-208ENST00000523487 JPH4Q96JJ6 628 aa16.79■□□□□ 0.28
RNF130-208ENST00000523487 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
RNF130-208ENST00000523487 CEP170Q5SW79 1584 aa16.76■□□□□ 0.27
RNF130-208ENST00000523487 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms