RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
TOP1MT-217ENST00000523417 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
TOP1MT-217ENST00000523417 ABCC9O60706 1549 aa28.12■■■□□ 2.09
TOP1MT-217ENST00000523417 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
TOP1MT-217ENST00000523417 NACADO15069 1562 aa26.73■■□□□ 1.87
TOP1MT-217ENST00000523417 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
TOP1MT-217ENST00000523417 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
TOP1MT-217ENST00000523417 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
TOP1MT-217ENST00000523417 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
TOP1MT-217ENST00000523417 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
TOP1MT-217ENST00000523417 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
TOP1MT-217ENST00000523417 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
TOP1MT-217ENST00000523417 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
TOP1MT-217ENST00000523417 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
TOP1MT-217ENST00000523417 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
TOP1MT-217ENST00000523417 CC2D2AQ9P2K1 1620 aa25.4■■□□□ 1.66
TOP1MT-217ENST00000523417 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
TOP1MT-217ENST00000523417 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
TOP1MT-217ENST00000523417 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
TOP1MT-217ENST00000523417 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
TOP1MT-217ENST00000523417 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
TOP1MT-217ENST00000523417 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
TOP1MT-217ENST00000523417 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
TOP1MT-217ENST00000523417 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
TOP1MT-217ENST00000523417 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
TOP1MT-217ENST00000523417 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
TOP1MT-217ENST00000523417 CUX2O14529 1486 aa24.3■■□□□ 1.48
TOP1MT-217ENST00000523417 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
TOP1MT-217ENST00000523417 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
TOP1MT-217ENST00000523417 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
TOP1MT-217ENST00000523417 NESP48681 1621 aa24.18■■□□□ 1.46
TOP1MT-217ENST00000523417 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
TOP1MT-217ENST00000523417 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
TOP1MT-217ENST00000523417 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
TOP1MT-217ENST00000523417 WIZO95785 1651 aa23.91■■□□□ 1.42
TOP1MT-217ENST00000523417 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
TOP1MT-217ENST00000523417 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
TOP1MT-217ENST00000523417 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
TOP1MT-217ENST00000523417 CFTRP13569 1480 aa23.72■■□□□ 1.39
TOP1MT-217ENST00000523417 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
TOP1MT-217ENST00000523417 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
TOP1MT-217ENST00000523417 WDR62O43379 1518 aa23.64■■□□□ 1.38
TOP1MT-217ENST00000523417 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
TOP1MT-217ENST00000523417 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
TOP1MT-217ENST00000523417 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
TOP1MT-217ENST00000523417 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
TOP1MT-217ENST00000523417 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
TOP1MT-217ENST00000523417 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
TOP1MT-217ENST00000523417 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
TOP1MT-217ENST00000523417 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
TOP1MT-217ENST00000523417 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
TOP1MT-217ENST00000523417 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
TOP1MT-217ENST00000523417 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
TOP1MT-217ENST00000523417 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
TOP1MT-217ENST00000523417 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
TOP1MT-217ENST00000523417 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
TOP1MT-217ENST00000523417 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
TOP1MT-217ENST00000523417 SOGA1O94964 1423 aa22.91■■□□□ 1.26
TOP1MT-217ENST00000523417 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
TOP1MT-217ENST00000523417 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
TOP1MT-217ENST00000523417 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.25
TOP1MT-217ENST00000523417 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
TOP1MT-217ENST00000523417 CUX1P39880 1505 aa22.8■■□□□ 1.24
TOP1MT-217ENST00000523417 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
TOP1MT-217ENST00000523417 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
TOP1MT-217ENST00000523417 RIMBP3CA6NJZ7 1639 aa22.76■■□□□ 1.23
TOP1MT-217ENST00000523417 RIMBP3BA6NNM3 1639 aa22.76■■□□□ 1.23
TOP1MT-217ENST00000523417 RIMBP3Q9UFD9 1639 aa22.76■■□□□ 1.23
TOP1MT-217ENST00000523417 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
TOP1MT-217ENST00000523417 FBLN2P98095 1184 aa22.75■■□□□ 1.23
TOP1MT-217ENST00000523417 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
TOP1MT-217ENST00000523417 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
TOP1MT-217ENST00000523417 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
TOP1MT-217ENST00000523417 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
TOP1MT-217ENST00000523417 CHD1O14646 1710 aa22.65■■□□□ 1.22
TOP1MT-217ENST00000523417 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
TOP1MT-217ENST00000523417 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
TOP1MT-217ENST00000523417 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
TOP1MT-217ENST00000523417 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
TOP1MT-217ENST00000523417 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
TOP1MT-217ENST00000523417 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
TOP1MT-217ENST00000523417 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
TOP1MT-217ENST00000523417 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
TOP1MT-217ENST00000523417 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
TOP1MT-217ENST00000523417 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
TOP1MT-217ENST00000523417 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
TOP1MT-217ENST00000523417 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
TOP1MT-217ENST00000523417 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
TOP1MT-217ENST00000523417 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
TOP1MT-217ENST00000523417 NUP160Q12769 1436 aa22.33■■□□□ 1.17
TOP1MT-217ENST00000523417 TRHP20396 242 aaPredicted RBP22.33■■□□□ 1.17
TOP1MT-217ENST00000523417 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
TOP1MT-217ENST00000523417 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
TOP1MT-217ENST00000523417 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
TOP1MT-217ENST00000523417 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
TOP1MT-217ENST00000523417 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
TOP1MT-217ENST00000523417 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
TOP1MT-217ENST00000523417 IGF1RP08069 1367 aa22.14■■□□□ 1.14
TOP1MT-217ENST00000523417 SHROOM2Q13796 1616 aa22.14■■□□□ 1.14
TOP1MT-217ENST00000523417 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms