RNA–Protein interactions for RNA: ENST00000523388.5

PTK2-243, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-243ENST00000523388 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
PTK2-243ENST00000523388 ABCC9O60706 1549 aa22.21■■□□□ 1.15
PTK2-243ENST00000523388 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
PTK2-243ENST00000523388 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
PTK2-243ENST00000523388 NACADO15069 1562 aa21.02■□□□□ 0.96
PTK2-243ENST00000523388 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
PTK2-243ENST00000523388 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
PTK2-243ENST00000523388 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
PTK2-243ENST00000523388 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTK2-243ENST00000523388 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
PTK2-243ENST00000523388 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
PTK2-243ENST00000523388 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
PTK2-243ENST00000523388 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
PTK2-243ENST00000523388 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
PTK2-243ENST00000523388 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
PTK2-243ENST00000523388 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
PTK2-243ENST00000523388 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
PTK2-243ENST00000523388 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
PTK2-243ENST00000523388 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
PTK2-243ENST00000523388 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
PTK2-243ENST00000523388 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
PTK2-243ENST00000523388 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
PTK2-243ENST00000523388 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
PTK2-243ENST00000523388 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
PTK2-243ENST00000523388 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
PTK2-243ENST00000523388 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
PTK2-243ENST00000523388 CUX2O14529 1486 aa19.22■□□□□ 0.67
PTK2-243ENST00000523388 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
PTK2-243ENST00000523388 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
PTK2-243ENST00000523388 NESP48681 1621 aa19.03■□□□□ 0.64
PTK2-243ENST00000523388 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
PTK2-243ENST00000523388 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
PTK2-243ENST00000523388 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
PTK2-243ENST00000523388 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
PTK2-243ENST00000523388 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.61
PTK2-243ENST00000523388 WIZO95785 1651 aa18.76■□□□□ 0.59
PTK2-243ENST00000523388 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
PTK2-243ENST00000523388 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
PTK2-243ENST00000523388 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
PTK2-243ENST00000523388 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
PTK2-243ENST00000523388 WDR62O43379 1518 aa18.63■□□□□ 0.57
PTK2-243ENST00000523388 CFTRP13569 1480 aa18.58■□□□□ 0.57
PTK2-243ENST00000523388 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
PTK2-243ENST00000523388 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
PTK2-243ENST00000523388 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
PTK2-243ENST00000523388 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
PTK2-243ENST00000523388 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
PTK2-243ENST00000523388 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
PTK2-243ENST00000523388 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
PTK2-243ENST00000523388 ABCC8Q09428 1581 aa18.27■□□□□ 0.52
PTK2-243ENST00000523388 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
PTK2-243ENST00000523388 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
PTK2-243ENST00000523388 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
PTK2-243ENST00000523388 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
PTK2-243ENST00000523388 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
PTK2-243ENST00000523388 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTK2-243ENST00000523388 RIMBP3CA6NJZ7 1639 aa18.03■□□□□ 0.48
PTK2-243ENST00000523388 RIMBP3BA6NNM3 1639 aa18.03■□□□□ 0.48
PTK2-243ENST00000523388 RIMBP3Q9UFD9 1639 aa18.03■□□□□ 0.48
PTK2-243ENST00000523388 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
PTK2-243ENST00000523388 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
PTK2-243ENST00000523388 FBLN2P98095 1184 aa18.01■□□□□ 0.47
PTK2-243ENST00000523388 SOGA1O94964 1423 aa18■□□□□ 0.47
PTK2-243ENST00000523388 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
PTK2-243ENST00000523388 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
PTK2-243ENST00000523388 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
PTK2-243ENST00000523388 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
PTK2-243ENST00000523388 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
PTK2-243ENST00000523388 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
PTK2-243ENST00000523388 CHD1O14646 1710 aa17.91■□□□□ 0.46
PTK2-243ENST00000523388 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
PTK2-243ENST00000523388 CUX1P39880 1505 aa17.86■□□□□ 0.45
PTK2-243ENST00000523388 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
PTK2-243ENST00000523388 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
PTK2-243ENST00000523388 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
PTK2-243ENST00000523388 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
PTK2-243ENST00000523388 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
PTK2-243ENST00000523388 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
PTK2-243ENST00000523388 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
PTK2-243ENST00000523388 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
PTK2-243ENST00000523388 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
PTK2-243ENST00000523388 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
PTK2-243ENST00000523388 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
PTK2-243ENST00000523388 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
PTK2-243ENST00000523388 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
PTK2-243ENST00000523388 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
PTK2-243ENST00000523388 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
PTK2-243ENST00000523388 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
PTK2-243ENST00000523388 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
PTK2-243ENST00000523388 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
PTK2-243ENST00000523388 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
PTK2-243ENST00000523388 ADAMTS12P58397 1594 aa17.52■□□□□ 0.39
PTK2-243ENST00000523388 NUP160Q12769 1436 aa17.51■□□□□ 0.39
PTK2-243ENST00000523388 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
PTK2-243ENST00000523388 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
PTK2-243ENST00000523388 ERCC6L2Q5T890 1561 aa17.42■□□□□ 0.38
PTK2-243ENST00000523388 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
PTK2-243ENST00000523388 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
PTK2-243ENST00000523388 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
PTK2-243ENST00000523388 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms