RNA–Protein interactions for RNA: ENST00000523371.5

GSDMB-214, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 1,127 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-214ENST00000523371 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
GSDMB-214ENST00000523371 ABCC9O60706 1549 aa14.43□□□□□ -0.1
GSDMB-214ENST00000523371 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
GSDMB-214ENST00000523371 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
GSDMB-214ENST00000523371 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
GSDMB-214ENST00000523371 NACADO15069 1562 aa13.54□□□□□ -0.24
GSDMB-214ENST00000523371 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
GSDMB-214ENST00000523371 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.256e-8■■□□□ 14
GSDMB-214ENST00000523371 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
GSDMB-214ENST00000523371 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
GSDMB-214ENST00000523371 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
GSDMB-214ENST00000523371 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
GSDMB-214ENST00000523371 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
GSDMB-214ENST00000523371 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
GSDMB-214ENST00000523371 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
GSDMB-214ENST00000523371 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
GSDMB-214ENST00000523371 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
GSDMB-214ENST00000523371 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
GSDMB-214ENST00000523371 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
GSDMB-214ENST00000523371 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
GSDMB-214ENST00000523371 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
GSDMB-214ENST00000523371 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
GSDMB-214ENST00000523371 NESP48681 1621 aa12.42□□□□□ -0.42
GSDMB-214ENST00000523371 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
GSDMB-214ENST00000523371 CUX2O14529 1486 aa12.4□□□□□ -0.42
GSDMB-214ENST00000523371 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
GSDMB-214ENST00000523371 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
GSDMB-214ENST00000523371 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
GSDMB-214ENST00000523371 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
GSDMB-214ENST00000523371 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
GSDMB-214ENST00000523371 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
GSDMB-214ENST00000523371 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
GSDMB-214ENST00000523371 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
GSDMB-214ENST00000523371 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
GSDMB-214ENST00000523371 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
GSDMB-214ENST00000523371 WIZO95785 1651 aa12.15□□□□□ -0.46
GSDMB-214ENST00000523371 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
GSDMB-214ENST00000523371 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
GSDMB-214ENST00000523371 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
GSDMB-214ENST00000523371 WDR62O43379 1518 aa12.06□□□□□ -0.48
GSDMB-214ENST00000523371 CFTRP13569 1480 aa12.04□□□□□ -0.48
GSDMB-214ENST00000523371 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.48
GSDMB-214ENST00000523371 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
GSDMB-214ENST00000523371 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
GSDMB-214ENST00000523371 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
GSDMB-214ENST00000523371 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
GSDMB-214ENST00000523371 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
GSDMB-214ENST00000523371 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
GSDMB-214ENST00000523371 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
GSDMB-214ENST00000523371 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
GSDMB-214ENST00000523371 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
GSDMB-214ENST00000523371 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
GSDMB-214ENST00000523371 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.53
GSDMB-214ENST00000523371 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
GSDMB-214ENST00000523371 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
GSDMB-214ENST00000523371 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
GSDMB-214ENST00000523371 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
GSDMB-214ENST00000523371 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
GSDMB-214ENST00000523371 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
GSDMB-214ENST00000523371 EIF4G3O43432 1585 aaKnown RBP11.68□□□□□ -0.54
GSDMB-214ENST00000523371 ABCC8Q09428 1581 aa11.68□□□□□ -0.54
GSDMB-214ENST00000523371 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
GSDMB-214ENST00000523371 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
GSDMB-214ENST00000523371 TDRD9Q8NDG6 1382 aaKnown RBP11.64□□□□□ -0.55
GSDMB-214ENST00000523371 SOGA1O94964 1423 aa11.61□□□□□ -0.55
GSDMB-214ENST00000523371 CYB5RLQ6IPT4 315 aa11.6□□□□□ -0.55
GSDMB-214ENST00000523371 CUX1P39880 1505 aa11.6□□□□□ -0.55
GSDMB-214ENST00000523371 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
GSDMB-214ENST00000523371 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
GSDMB-214ENST00000523371 FBLN2P98095 1184 aa11.58□□□□□ -0.56
GSDMB-214ENST00000523371 CHD1O14646 1710 aa11.56□□□□□ -0.56
GSDMB-214ENST00000523371 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
GSDMB-214ENST00000523371 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
GSDMB-214ENST00000523371 GRIN2BQ13224 1484 aa11.5□□□□□ -0.57
GSDMB-214ENST00000523371 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
GSDMB-214ENST00000523371 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
GSDMB-214ENST00000523371 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
GSDMB-214ENST00000523371 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
GSDMB-214ENST00000523371 SUPT5HO00267 1087 aaKnown RBP11.47□□□□□ -0.57
GSDMB-214ENST00000523371 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
GSDMB-214ENST00000523371 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
GSDMB-214ENST00000523371 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
GSDMB-214ENST00000523371 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
GSDMB-214ENST00000523371 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
GSDMB-214ENST00000523371 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
GSDMB-214ENST00000523371 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
GSDMB-214ENST00000523371 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
GSDMB-214ENST00000523371 NUP160Q12769 1436 aa11.36□□□□□ -0.59
GSDMB-214ENST00000523371 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
GSDMB-214ENST00000523371 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
GSDMB-214ENST00000523371 AEBP2Q6ZN18 517 aaPredicted RBP11.34□□□□□ -0.59
GSDMB-214ENST00000523371 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
GSDMB-214ENST00000523371 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
GSDMB-214ENST00000523371 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
GSDMB-214ENST00000523371 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
GSDMB-214ENST00000523371 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
GSDMB-214ENST00000523371 ERICH3Q5RHP9 1530 aa11.27□□□□□ -0.61
GSDMB-214ENST00000523371 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
GSDMB-214ENST00000523371 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
GSDMB-214ENST00000523371 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms