RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
CTNNA1-237ENST00000523275 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
CTNNA1-237ENST00000523275 ABCC9O60706 1549 aa26.09■■□□□ 1.77
CTNNA1-237ENST00000523275 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
CTNNA1-237ENST00000523275 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
CTNNA1-237ENST00000523275 NACADO15069 1562 aa24.71■■□□□ 1.55
CTNNA1-237ENST00000523275 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
CTNNA1-237ENST00000523275 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
CTNNA1-237ENST00000523275 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
CTNNA1-237ENST00000523275 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
CTNNA1-237ENST00000523275 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
CTNNA1-237ENST00000523275 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
CTNNA1-237ENST00000523275 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
CTNNA1-237ENST00000523275 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
CTNNA1-237ENST00000523275 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
CTNNA1-237ENST00000523275 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
CTNNA1-237ENST00000523275 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
CTNNA1-237ENST00000523275 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
CTNNA1-237ENST00000523275 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
CTNNA1-237ENST00000523275 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
CTNNA1-237ENST00000523275 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
CTNNA1-237ENST00000523275 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
CTNNA1-237ENST00000523275 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
CTNNA1-237ENST00000523275 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
CTNNA1-237ENST00000523275 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
CTNNA1-237ENST00000523275 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
CTNNA1-237ENST00000523275 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
CTNNA1-237ENST00000523275 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
CTNNA1-237ENST00000523275 CUX2O14529 1486 aa22.44■■□□□ 1.18
CTNNA1-237ENST00000523275 NESP48681 1621 aa22.42■■□□□ 1.18
CTNNA1-237ENST00000523275 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
CTNNA1-237ENST00000523275 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
CTNNA1-237ENST00000523275 WIZO95785 1651 aa22.21■■□□□ 1.15
CTNNA1-237ENST00000523275 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
CTNNA1-237ENST00000523275 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
CTNNA1-237ENST00000523275 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
CTNNA1-237ENST00000523275 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
CTNNA1-237ENST00000523275 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
CTNNA1-237ENST00000523275 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
CTNNA1-237ENST00000523275 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
CTNNA1-237ENST00000523275 CFTRP13569 1480 aa21.92■■□□□ 1.1
CTNNA1-237ENST00000523275 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
CTNNA1-237ENST00000523275 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
CTNNA1-237ENST00000523275 WDR62O43379 1518 aa21.88■■□□□ 1.09
CTNNA1-237ENST00000523275 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
CTNNA1-237ENST00000523275 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
CTNNA1-237ENST00000523275 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
CTNNA1-237ENST00000523275 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
CTNNA1-237ENST00000523275 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
CTNNA1-237ENST00000523275 TOPBP1Q92547 1522 aa21.48■■□□□ 1.03
CTNNA1-237ENST00000523275 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
CTNNA1-237ENST00000523275 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
CTNNA1-237ENST00000523275 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
CTNNA1-237ENST00000523275 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
CTNNA1-237ENST00000523275 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
CTNNA1-237ENST00000523275 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.998e-7■■■■■ 28.7
CTNNA1-237ENST00000523275 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
CTNNA1-237ENST00000523275 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
CTNNA1-237ENST00000523275 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
CTNNA1-237ENST00000523275 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
CTNNA1-237ENST00000523275 SOGA1O94964 1423 aa21.21■□□□□ 0.99
CTNNA1-237ENST00000523275 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
CTNNA1-237ENST00000523275 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
CTNNA1-237ENST00000523275 FBLN2P98095 1184 aa21.15■□□□□ 0.98
CTNNA1-237ENST00000523275 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
CTNNA1-237ENST00000523275 CUX1P39880 1505 aa21.13■□□□□ 0.97
CTNNA1-237ENST00000523275 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
CTNNA1-237ENST00000523275 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
CTNNA1-237ENST00000523275 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
CTNNA1-237ENST00000523275 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
CTNNA1-237ENST00000523275 CHD1O14646 1710 aa21.05■□□□□ 0.96
CTNNA1-237ENST00000523275 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
CTNNA1-237ENST00000523275 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
CTNNA1-237ENST00000523275 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
CTNNA1-237ENST00000523275 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
CTNNA1-237ENST00000523275 GRIN2BQ13224 1484 aa21■□□□□ 0.95
CTNNA1-237ENST00000523275 MAGI1Q96QZ7 1491 aaPredicted RBP20.97■□□□□ 0.95
CTNNA1-237ENST00000523275 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
CTNNA1-237ENST00000523275 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
CTNNA1-237ENST00000523275 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
CTNNA1-237ENST00000523275 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
CTNNA1-237ENST00000523275 WRNQ14191 1432 aaPredicted RBP eCLIP20.89■□□□□ 0.94
CTNNA1-237ENST00000523275 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
CTNNA1-237ENST00000523275 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
CTNNA1-237ENST00000523275 CLASP1Q7Z460 1538 aa20.85■□□□□ 0.93
CTNNA1-237ENST00000523275 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
CTNNA1-237ENST00000523275 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
CTNNA1-237ENST00000523275 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
CTNNA1-237ENST00000523275 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
CTNNA1-237ENST00000523275 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
CTNNA1-237ENST00000523275 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
CTNNA1-237ENST00000523275 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
CTNNA1-237ENST00000523275 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
CTNNA1-237ENST00000523275 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
CTNNA1-237ENST00000523275 NUP160Q12769 1436 aa20.64■□□□□ 0.89
CTNNA1-237ENST00000523275 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
CTNNA1-237ENST00000523275 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
CTNNA1-237ENST00000523275 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
CTNNA1-237ENST00000523275 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
CTNNA1-237ENST00000523275 IGF1RP08069 1367 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms