RNA–Protein interactions for RNA: ENST00000523268.6

LETM2-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 1 (best)

Gene LETM2, Length 2,745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-206ENST00000523268 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.67
LETM2-206ENST00000523268 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
LETM2-206ENST00000523268 ABCC9O60706 1549 aa22.75■■□□□ 1.23
LETM2-206ENST00000523268 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
LETM2-206ENST00000523268 NACADO15069 1562 aa22.05■■□□□ 1.12
LETM2-206ENST00000523268 MYO15BQ96JP2 1530 aa21.95■■□□□ 1.1
LETM2-206ENST00000523268 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
LETM2-206ENST00000523268 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
LETM2-206ENST00000523268 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
LETM2-206ENST00000523268 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
LETM2-206ENST00000523268 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
LETM2-206ENST00000523268 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
LETM2-206ENST00000523268 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
LETM2-206ENST00000523268 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.92
LETM2-206ENST00000523268 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
LETM2-206ENST00000523268 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
LETM2-206ENST00000523268 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
LETM2-206ENST00000523268 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
LETM2-206ENST00000523268 CUX2O14529 1486 aa20.36■□□□□ 0.85
LETM2-206ENST00000523268 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
LETM2-206ENST00000523268 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
LETM2-206ENST00000523268 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
LETM2-206ENST00000523268 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
LETM2-206ENST00000523268 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
LETM2-206ENST00000523268 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
LETM2-206ENST00000523268 SMARCA4P51532 1647 aa19.92■□□□□ 0.78
LETM2-206ENST00000523268 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
LETM2-206ENST00000523268 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
LETM2-206ENST00000523268 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
LETM2-206ENST00000523268 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
LETM2-206ENST00000523268 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
LETM2-206ENST00000523268 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
LETM2-206ENST00000523268 WDR62O43379 1518 aa19.5■□□□□ 0.71
LETM2-206ENST00000523268 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
LETM2-206ENST00000523268 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
LETM2-206ENST00000523268 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
LETM2-206ENST00000523268 NESP48681 1621 aa19.41■□□□□ 0.7
LETM2-206ENST00000523268 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
LETM2-206ENST00000523268 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
LETM2-206ENST00000523268 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
LETM2-206ENST00000523268 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.68
LETM2-206ENST00000523268 CFTRP13569 1480 aa19.23■□□□□ 0.67
LETM2-206ENST00000523268 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
LETM2-206ENST00000523268 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
LETM2-206ENST00000523268 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
LETM2-206ENST00000523268 WIZO95785 1651 aa19.09■□□□□ 0.65
LETM2-206ENST00000523268 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
LETM2-206ENST00000523268 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
LETM2-206ENST00000523268 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
LETM2-206ENST00000523268 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
LETM2-206ENST00000523268 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
LETM2-206ENST00000523268 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
LETM2-206ENST00000523268 DNMBPQ6XZF7 1577 aa18.86■□□□□ 0.61
LETM2-206ENST00000523268 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
LETM2-206ENST00000523268 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
LETM2-206ENST00000523268 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
LETM2-206ENST00000523268 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
LETM2-206ENST00000523268 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
LETM2-206ENST00000523268 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
LETM2-206ENST00000523268 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
LETM2-206ENST00000523268 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
LETM2-206ENST00000523268 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
LETM2-206ENST00000523268 CHD1O14646 1710 aa18.6■□□□□ 0.57
LETM2-206ENST00000523268 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
LETM2-206ENST00000523268 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
LETM2-206ENST00000523268 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
LETM2-206ENST00000523268 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
LETM2-206ENST00000523268 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
LETM2-206ENST00000523268 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
LETM2-206ENST00000523268 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
LETM2-206ENST00000523268 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
LETM2-206ENST00000523268 SOGA1O94964 1423 aa18.41■□□□□ 0.54
LETM2-206ENST00000523268 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
LETM2-206ENST00000523268 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
LETM2-206ENST00000523268 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.53
LETM2-206ENST00000523268 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.53
LETM2-206ENST00000523268 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
LETM2-206ENST00000523268 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
LETM2-206ENST00000523268 CUX1P39880 1505 aa18.28■□□□□ 0.52
LETM2-206ENST00000523268 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
LETM2-206ENST00000523268 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
LETM2-206ENST00000523268 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
LETM2-206ENST00000523268 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
LETM2-206ENST00000523268 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
LETM2-206ENST00000523268 NUP160Q12769 1436 aa18.19■□□□□ 0.5
LETM2-206ENST00000523268 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
LETM2-206ENST00000523268 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
LETM2-206ENST00000523268 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
LETM2-206ENST00000523268 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
LETM2-206ENST00000523268 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
LETM2-206ENST00000523268 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LETM2-206ENST00000523268 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
LETM2-206ENST00000523268 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.49
LETM2-206ENST00000523268 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
LETM2-206ENST00000523268 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
LETM2-206ENST00000523268 FBLN2P98095 1184 aa18.02■□□□□ 0.48
LETM2-206ENST00000523268 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
LETM2-206ENST00000523268 CUL7Q14999 1698 aa17.94■□□□□ 0.46
LETM2-206ENST00000523268 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
LETM2-206ENST00000523268 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms