RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
VIRMA-208ENST00000523263 ABCC9O60706 1549 aa22.05■■□□□ 1.12
VIRMA-208ENST00000523263 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.07
VIRMA-208ENST00000523263 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
VIRMA-208ENST00000523263 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
VIRMA-208ENST00000523263 NACADO15069 1562 aa20.72■□□□□ 0.91
VIRMA-208ENST00000523263 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
VIRMA-208ENST00000523263 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
VIRMA-208ENST00000523263 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
VIRMA-208ENST00000523263 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
VIRMA-208ENST00000523263 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
VIRMA-208ENST00000523263 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
VIRMA-208ENST00000523263 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
VIRMA-208ENST00000523263 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
VIRMA-208ENST00000523263 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
VIRMA-208ENST00000523263 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
VIRMA-208ENST00000523263 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
VIRMA-208ENST00000523263 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
VIRMA-208ENST00000523263 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
VIRMA-208ENST00000523263 CUX2O14529 1486 aa19.22■□□□□ 0.67
VIRMA-208ENST00000523263 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
VIRMA-208ENST00000523263 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
VIRMA-208ENST00000523263 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
VIRMA-208ENST00000523263 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
VIRMA-208ENST00000523263 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
VIRMA-208ENST00000523263 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
VIRMA-208ENST00000523263 NESP48681 1621 aa18.84■□□□□ 0.61
VIRMA-208ENST00000523263 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
VIRMA-208ENST00000523263 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
VIRMA-208ENST00000523263 BAZ1AQ9NRL2 1556 aaPredicted RBP18.76■□□□□ 0.59
VIRMA-208ENST00000523263 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
VIRMA-208ENST00000523263 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
VIRMA-208ENST00000523263 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
VIRMA-208ENST00000523263 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
VIRMA-208ENST00000523263 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
VIRMA-208ENST00000523263 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
VIRMA-208ENST00000523263 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
VIRMA-208ENST00000523263 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
VIRMA-208ENST00000523263 WDR62O43379 1518 aa18.44■□□□□ 0.54
VIRMA-208ENST00000523263 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
VIRMA-208ENST00000523263 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
VIRMA-208ENST00000523263 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
VIRMA-208ENST00000523263 CFTRP13569 1480 aa18.28■□□□□ 0.52
VIRMA-208ENST00000523263 WIZO95785 1651 aa18.26■□□□□ 0.51
VIRMA-208ENST00000523263 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
VIRMA-208ENST00000523263 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
VIRMA-208ENST00000523263 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
VIRMA-208ENST00000523263 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
VIRMA-208ENST00000523263 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
VIRMA-208ENST00000523263 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
VIRMA-208ENST00000523263 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
VIRMA-208ENST00000523263 ZNF608Q9ULD9 1512 aaPredicted RBP17.96■□□□□ 0.47
VIRMA-208ENST00000523263 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
VIRMA-208ENST00000523263 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
VIRMA-208ENST00000523263 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
VIRMA-208ENST00000523263 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
VIRMA-208ENST00000523263 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
VIRMA-208ENST00000523263 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
VIRMA-208ENST00000523263 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
VIRMA-208ENST00000523263 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
VIRMA-208ENST00000523263 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.44
VIRMA-208ENST00000523263 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
VIRMA-208ENST00000523263 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
VIRMA-208ENST00000523263 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
VIRMA-208ENST00000523263 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
VIRMA-208ENST00000523263 FBLN2P98095 1184 aa17.69■□□□□ 0.42
VIRMA-208ENST00000523263 CHD1O14646 1710 aa17.66■□□□□ 0.42
VIRMA-208ENST00000523263 SOGA1O94964 1423 aa17.65■□□□□ 0.42
VIRMA-208ENST00000523263 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
VIRMA-208ENST00000523263 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
VIRMA-208ENST00000523263 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
VIRMA-208ENST00000523263 CLASP1Q7Z460 1538 aa17.58■□□□□ 0.41
VIRMA-208ENST00000523263 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
VIRMA-208ENST00000523263 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
VIRMA-208ENST00000523263 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
VIRMA-208ENST00000523263 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
VIRMA-208ENST00000523263 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
VIRMA-208ENST00000523263 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
VIRMA-208ENST00000523263 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
VIRMA-208ENST00000523263 CUX1P39880 1505 aa17.47■□□□□ 0.39
VIRMA-208ENST00000523263 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
VIRMA-208ENST00000523263 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
VIRMA-208ENST00000523263 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
VIRMA-208ENST00000523263 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
VIRMA-208ENST00000523263 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
VIRMA-208ENST00000523263 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
VIRMA-208ENST00000523263 NUP160Q12769 1436 aa17.29■□□□□ 0.36
VIRMA-208ENST00000523263 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
VIRMA-208ENST00000523263 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
VIRMA-208ENST00000523263 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
VIRMA-208ENST00000523263 CEP170Q5SW79 1584 aa17.21■□□□□ 0.35
VIRMA-208ENST00000523263 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
VIRMA-208ENST00000523263 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
VIRMA-208ENST00000523263 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
VIRMA-208ENST00000523263 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
VIRMA-208ENST00000523263 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
VIRMA-208ENST00000523263 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
VIRMA-208ENST00000523263 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
VIRMA-208ENST00000523263 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
VIRMA-208ENST00000523263 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms