RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 NISCHQ9Y2I1 1504 aa27.78■■■□□ 2.04
CD74-209ENST00000523208 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
CD74-209ENST00000523208 ABCC9O60706 1549 aa23.79■■□□□ 1.4
CD74-209ENST00000523208 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
CD74-209ENST00000523208 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
CD74-209ENST00000523208 NACADO15069 1562 aa23.05■■□□□ 1.28
CD74-209ENST00000523208 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
CD74-209ENST00000523208 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
CD74-209ENST00000523208 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
CD74-209ENST00000523208 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
CD74-209ENST00000523208 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
CD74-209ENST00000523208 BICRAQ9NZM4 1560 aa22.35■■□□□ 1.17
CD74-209ENST00000523208 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
CD74-209ENST00000523208 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
CD74-209ENST00000523208 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CD74-209ENST00000523208 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
CD74-209ENST00000523208 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
CD74-209ENST00000523208 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
CD74-209ENST00000523208 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
CD74-209ENST00000523208 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
CD74-209ENST00000523208 WIZO95785 1651 aa21.36■■□□□ 1.01
CD74-209ENST00000523208 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
CD74-209ENST00000523208 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
CD74-209ENST00000523208 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
CD74-209ENST00000523208 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
CD74-209ENST00000523208 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
CD74-209ENST00000523208 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
CD74-209ENST00000523208 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
CD74-209ENST00000523208 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
CD74-209ENST00000523208 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
CD74-209ENST00000523208 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
CD74-209ENST00000523208 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
CD74-209ENST00000523208 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
CD74-209ENST00000523208 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
CD74-209ENST00000523208 NESP48681 1621 aa20.68■□□□□ 0.9
CD74-209ENST00000523208 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
CD74-209ENST00000523208 CFTRP13569 1480 aa20.52■□□□□ 0.88
CD74-209ENST00000523208 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
CD74-209ENST00000523208 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
CD74-209ENST00000523208 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
CD74-209ENST00000523208 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
CD74-209ENST00000523208 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
CD74-209ENST00000523208 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
CD74-209ENST00000523208 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
CD74-209ENST00000523208 WDR62O43379 1518 aa20.27■□□□□ 0.83
CD74-209ENST00000523208 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
CD74-209ENST00000523208 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
CD74-209ENST00000523208 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
CD74-209ENST00000523208 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CD74-209ENST00000523208 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
CD74-209ENST00000523208 SYNJ1O43426 1573 aa20.14■□□□□ 0.81
CD74-209ENST00000523208 CUX1P39880 1505 aa20.14■□□□□ 0.81
CD74-209ENST00000523208 CUX2O14529 1486 aa20.11■□□□□ 0.81
CD74-209ENST00000523208 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
CD74-209ENST00000523208 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
CD74-209ENST00000523208 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
CD74-209ENST00000523208 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
CD74-209ENST00000523208 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
CD74-209ENST00000523208 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
CD74-209ENST00000523208 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
CD74-209ENST00000523208 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
CD74-209ENST00000523208 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
CD74-209ENST00000523208 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
CD74-209ENST00000523208 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CD74-209ENST00000523208 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
CD74-209ENST00000523208 SOGA1O94964 1423 aa19.78■□□□□ 0.76
CD74-209ENST00000523208 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
CD74-209ENST00000523208 CHD1O14646 1710 aa19.71■□□□□ 0.75
CD74-209ENST00000523208 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.74
CD74-209ENST00000523208 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
CD74-209ENST00000523208 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
CD74-209ENST00000523208 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
CD74-209ENST00000523208 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
CD74-209ENST00000523208 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
CD74-209ENST00000523208 CUL7Q14999 1698 aa19.62■□□□□ 0.73
CD74-209ENST00000523208 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
CD74-209ENST00000523208 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.73
CD74-209ENST00000523208 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
CD74-209ENST00000523208 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
CD74-209ENST00000523208 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
CD74-209ENST00000523208 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
CD74-209ENST00000523208 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
CD74-209ENST00000523208 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
CD74-209ENST00000523208 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
CD74-209ENST00000523208 EEA1Q15075 1411 aa19.4■□□□□ 0.7
CD74-209ENST00000523208 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
CD74-209ENST00000523208 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
CD74-209ENST00000523208 KIF21BO75037 1637 aa19.36■□□□□ 0.69
CD74-209ENST00000523208 IGF1RP08069 1367 aa19.32■□□□□ 0.68
CD74-209ENST00000523208 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
CD74-209ENST00000523208 FBLN2P98095 1184 aa19.31■□□□□ 0.68
CD74-209ENST00000523208 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
CD74-209ENST00000523208 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
CD74-209ENST00000523208 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
CD74-209ENST00000523208 PRXQ9BXM0 1461 aa19.27■□□□□ 0.67
CD74-209ENST00000523208 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
CD74-209ENST00000523208 NUP160Q12769 1436 aa19.24■□□□□ 0.67
CD74-209ENST00000523208 IQGAP2Q13576 1575 aa19.22■□□□□ 0.67
CD74-209ENST00000523208 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
CD74-209ENST00000523208 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms