RNA–Protein interactions for RNA: ENST00000522839.1

MED30-204, Transcript of mediator complex subunit 30, humanhuman

TSL 1 (best) BASIC

Gene MED30, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED30-204ENST00000522839 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
MED30-204ENST00000522839 ABCC9O60706 1549 aa19.4■□□□□ 0.7
MED30-204ENST00000522839 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
MED30-204ENST00000522839 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
MED30-204ENST00000522839 NACADO15069 1562 aa18.23■□□□□ 0.51
MED30-204ENST00000522839 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
MED30-204ENST00000522839 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
MED30-204ENST00000522839 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
MED30-204ENST00000522839 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
MED30-204ENST00000522839 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
MED30-204ENST00000522839 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
MED30-204ENST00000522839 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
MED30-204ENST00000522839 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
MED30-204ENST00000522839 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
MED30-204ENST00000522839 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
MED30-204ENST00000522839 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
MED30-204ENST00000522839 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
MED30-204ENST00000522839 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
MED30-204ENST00000522839 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
MED30-204ENST00000522839 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
MED30-204ENST00000522839 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
MED30-204ENST00000522839 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
MED30-204ENST00000522839 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
MED30-204ENST00000522839 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
MED30-204ENST00000522839 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
MED30-204ENST00000522839 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
MED30-204ENST00000522839 NESP48681 1621 aa16.68■□□□□ 0.26
MED30-204ENST00000522839 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
MED30-204ENST00000522839 PEG3Q9GZU2 1588 aa16.63■□□□□ 0.25
MED30-204ENST00000522839 CUX2O14529 1486 aa16.61■□□□□ 0.25
MED30-204ENST00000522839 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
MED30-204ENST00000522839 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
MED30-204ENST00000522839 WIZO95785 1651 aa16.46■□□□□ 0.23
MED30-204ENST00000522839 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
MED30-204ENST00000522839 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
MED30-204ENST00000522839 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
MED30-204ENST00000522839 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
MED30-204ENST00000522839 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
MED30-204ENST00000522839 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
MED30-204ENST00000522839 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
MED30-204ENST00000522839 WDR62O43379 1518 aa16.23■□□□□ 0.19
MED30-204ENST00000522839 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
MED30-204ENST00000522839 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
MED30-204ENST00000522839 CFTRP13569 1480 aa16.18■□□□□ 0.18
MED30-204ENST00000522839 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
MED30-204ENST00000522839 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
MED30-204ENST00000522839 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
MED30-204ENST00000522839 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
MED30-204ENST00000522839 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
MED30-204ENST00000522839 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
MED30-204ENST00000522839 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
MED30-204ENST00000522839 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
MED30-204ENST00000522839 IFT140Q96RY7 1462 aa15.86■□□□□ 0.13
MED30-204ENST00000522839 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
MED30-204ENST00000522839 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
MED30-204ENST00000522839 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
MED30-204ENST00000522839 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
MED30-204ENST00000522839 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.116e-6■■■■□ 25.1
MED30-204ENST00000522839 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
MED30-204ENST00000522839 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
MED30-204ENST00000522839 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
MED30-204ENST00000522839 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
MED30-204ENST00000522839 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
MED30-204ENST00000522839 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
MED30-204ENST00000522839 CUX1P39880 1505 aa15.67■□□□□ 0.1
MED30-204ENST00000522839 FGD5Q6ZNL6 1462 aa15.66■□□□□ 0.1
MED30-204ENST00000522839 ARHGEF11O15085 1522 aa15.66■□□□□ 0.1
MED30-204ENST00000522839 CHD1O14646 1710 aa15.65■□□□□ 0.1
MED30-204ENST00000522839 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
MED30-204ENST00000522839 SOGA1O94964 1423 aa15.64■□□□□ 0.09
MED30-204ENST00000522839 SUPT5HO00267 1087 aaKnown RBP15.63■□□□□ 0.09
MED30-204ENST00000522839 FBLN2P98095 1184 aa15.61■□□□□ 0.09
MED30-204ENST00000522839 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
MED30-204ENST00000522839 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
MED30-204ENST00000522839 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
MED30-204ENST00000522839 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
MED30-204ENST00000522839 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
MED30-204ENST00000522839 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
MED30-204ENST00000522839 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
MED30-204ENST00000522839 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.07
MED30-204ENST00000522839 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
MED30-204ENST00000522839 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
MED30-204ENST00000522839 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
MED30-204ENST00000522839 SYNJ2O15056 1496 aa15.45■□□□□ 0.06
MED30-204ENST00000522839 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
MED30-204ENST00000522839 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
MED30-204ENST00000522839 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
MED30-204ENST00000522839 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
MED30-204ENST00000522839 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
MED30-204ENST00000522839 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
MED30-204ENST00000522839 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
MED30-204ENST00000522839 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
MED30-204ENST00000522839 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
MED30-204ENST00000522839 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
MED30-204ENST00000522839 NUP160Q12769 1436 aa15.26■□□□□ 0.03
MED30-204ENST00000522839 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
MED30-204ENST00000522839 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
MED30-204ENST00000522839 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
MED30-204ENST00000522839 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
MED30-204ENST00000522839 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms