RNA–Protein interactions for RNA: ENST00000522764.1

PNMA2-206, Transcript of PNMA family member 2, humanhuman

TSL 4

Gene PNMA2, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA2-206ENST00000522764 NISCHQ9Y2I1 1504 aa69.7■■■■■ 8.75
PNMA2-206ENST00000522764 CCDC180Q9P1Z9 1646 aa62.02■■■■■ 7.52
PNMA2-206ENST00000522764 ABCC9O60706 1549 aa60.47■■■■■ 7.27
PNMA2-206ENST00000522764 RB1CC1Q8TDY2 1594 aa58.32■■■■■ 6.93
PNMA2-206ENST00000522764 NACADO15069 1562 aa58.28■■■■■ 6.92
PNMA2-206ENST00000522764 ZCCHC6Q5VYS8 1495 aaKnown RBP58.1■■■■■ 6.89
PNMA2-206ENST00000522764 DCAF8L2P0C7V8 631 aa58.07■■■■■ 6.89
PNMA2-206ENST00000522764 MYO15BQ96JP2 1530 aa57.99■■■■■ 6.87
PNMA2-206ENST00000522764 DCAF1Q9Y4B6 1507 aa57.75■■■■■ 6.83
PNMA2-206ENST00000522764 UNC13AQ9UPW8 1703 aa56.93■■■■■ 6.7
PNMA2-206ENST00000522764 SCRIBQ14160 1630 aa56.49■■■■■ 6.63
PNMA2-206ENST00000522764 BICRAQ9NZM4 1560 aa56.47■■■■■ 6.63
PNMA2-206ENST00000522764 PABPN1Q86U42 306 aaKnown RBP eCLIP56.45■■■■■ 6.63
PNMA2-206ENST00000522764 SHROOM4Q9ULL8 1493 aa56.06■■■■■ 6.56
PNMA2-206ENST00000522764 DNAJC5BQ9UF47 199 aa55.32■■■■■ 6.45
PNMA2-206ENST00000522764 EIF4G1Q04637 1599 aaKnown RBP55.02■■■■■ 6.4
PNMA2-206ENST00000522764 CC2D2AQ9P2K1 1620 aa54.75■■■■■ 6.36
PNMA2-206ENST00000522764 CECR2Q9BXF3 1484 aa54.37■■■■■ 6.29
PNMA2-206ENST00000522764 SMARCA4P51532 1647 aa54.08■■■■■ 6.25
PNMA2-206ENST00000522764 BAZ1AQ9NRL2 1556 aaPredicted RBP54.06■■■■■ 6.24
PNMA2-206ENST00000522764 SMARCA2P51531 1590 aa53.76■■■■■ 6.2
PNMA2-206ENST00000522764 ATAD2BQ9ULI0 1458 aa53.75■■■■■ 6.19
PNMA2-206ENST00000522764 NCAPD3P42695 1498 aa53.72■■■■■ 6.19
PNMA2-206ENST00000522764 MROH2BQ7Z745 1585 aa53.67■■■■■ 6.18
PNMA2-206ENST00000522764 PEG3Q9GZU2 1588 aa53.58■■■■■ 6.17
PNMA2-206ENST00000522764 HMGXB3Q12766 1538 aa53.52■■■■■ 6.16
PNMA2-206ENST00000522764 BAZ1BQ9UIG0 1483 aaKnown RBP53.33■■■■■ 6.13
PNMA2-206ENST00000522764 WIZO95785 1651 aa53.1■■■■■ 6.09
PNMA2-206ENST00000522764 RSF1Q96T23 1441 aaPredicted RBP53.09■■■■■ 6.09
PNMA2-206ENST00000522764 TOP2AP11388 1531 aaKnown RBP52.61■■■■■ 6.01
PNMA2-206ENST00000522764 LAMC3Q9Y6N6 1575 aa52.34■■■■■ 5.97
PNMA2-206ENST00000522764 NESP48681 1621 aa52.33■■■■■ 5.97
PNMA2-206ENST00000522764 ERCC6Q03468 1493 aa52.19■■■■■ 5.95
PNMA2-206ENST00000522764 CADPSQ9ULU8 1353 aa52.15■■■■■ 5.94
PNMA2-206ENST00000522764 PDS5BQ9NTI5 1447 aa51.98■■■■■ 5.91
PNMA2-206ENST00000522764 CCDC88BA6NC98 1476 aa51.92■■■■■ 5.9
PNMA2-206ENST00000522764 CFTRP13569 1480 aa51.87■■■■■ 5.89
PNMA2-206ENST00000522764 KIF21AQ7Z4S6 1674 aa51.78■■■■■ 5.88
PNMA2-206ENST00000522764 SUPT5HO00267 1087 aaKnown RBP51.72■■■■■ 5.87
PNMA2-206ENST00000522764 CUX2O14529 1486 aa51.66■■■■■ 5.86
PNMA2-206ENST00000522764 THOC2Q8NI27 1593 aaKnown RBP51.62■■■■■ 5.85
PNMA2-206ENST00000522764 FANCD2Q9BXW9 1451 aa51.56■■■■■ 5.84
PNMA2-206ENST00000522764 PRDM2Q13029 1718 aa51.55■■■■■ 5.84
PNMA2-206ENST00000522764 CEP164Q9UPV0 1460 aa51.53■■■■■ 5.84
PNMA2-206ENST00000522764 MRC2Q9UBG0 1479 aa51.42■■■■■ 5.82
PNMA2-206ENST00000522764 WDR62O43379 1518 aa51.26■■■■■ 5.8
PNMA2-206ENST00000522764 URB2Q14146 1524 aaKnown RBP51.01■■■■■ 5.76
PNMA2-206ENST00000522764 ABCC8Q09428 1581 aa50.82■■■■■ 5.73
PNMA2-206ENST00000522764 TOPBP1Q92547 1522 aa50.74■■■■■ 5.71
PNMA2-206ENST00000522764 DNMBPQ6XZF7 1577 aa50.73■■■■■ 5.71
PNMA2-206ENST00000522764 IFT140Q96RY7 1462 aa50.44■■■■■ 5.66
PNMA2-206ENST00000522764 CUX1P39880 1505 aa50.36■■■■■ 5.65
PNMA2-206ENST00000522764 POLA1P09884 1462 aaPredicted RBP50.31■■■■■ 5.64
PNMA2-206ENST00000522764 FGD5Q6ZNL6 1462 aa50.2■■■■■ 5.63
PNMA2-206ENST00000522764 TARBP1Q13395 1621 aaKnown RBP50.18■■■■■ 5.62
PNMA2-206ENST00000522764 ZNF608Q9ULD9 1512 aaPredicted RBP50.11■■■■■ 5.61
PNMA2-206ENST00000522764 WRNQ14191 1432 aaPredicted RBP eCLIP50.1■■■■■ 5.61
PNMA2-206ENST00000522764 SOGA1O94964 1423 aa50.09■■■■■ 5.61
PNMA2-206ENST00000522764 RAD54L2Q9Y4B4 1467 aa50.03■■■■■ 5.6
PNMA2-206ENST00000522764 BIVM-ERCC5R4GMW8 1640 aa50■■■■■ 5.6
PNMA2-206ENST00000522764 EIF4G3O43432 1585 aaKnown RBP50■■■■■ 5.59
PNMA2-206ENST00000522764 TOP2BQ02880 1626 aa50■■■■■ 5.59
PNMA2-206ENST00000522764 SYNJ1O43426 1573 aa49.94■■■■■ 5.59
PNMA2-206ENST00000522764 WDR97A6NE52 1622 aa49.91■■■■■ 5.58
PNMA2-206ENST00000522764 DNAJC5Q9H3Z4 198 aa49.87■■■■■ 5.57
PNMA2-206ENST00000522764 AQRO60306 1485 aaKnown RBP eCLIP49.83■■■■■ 5.57
PNMA2-206ENST00000522764 TDRD9Q8NDG6 1382 aaKnown RBP49.76■■■■■ 5.56
PNMA2-206ENST00000522764 ABCA10Q8WWZ4 1543 aa49.75■■■■■ 5.55
PNMA2-206ENST00000522764 ABCA5Q8WWZ7 1642 aa49.55■■■■■ 5.52
PNMA2-206ENST00000522764 GRIN2BQ13224 1484 aa49.55■■■■■ 5.52
PNMA2-206ENST00000522764 GAPVD1Q14C86 1478 aa49.55■■■■■ 5.52
PNMA2-206ENST00000522764 PBRM1Q86U86 1689 aa49.45■■■■■ 5.51
PNMA2-206ENST00000522764 OSCARQ8IYS5 282 aa49.44■■■■■ 5.51
PNMA2-206ENST00000522764 SNAPC4Q5SXM2 1469 aa49.44■■■■■ 5.5
PNMA2-206ENST00000522764 MAGI1Q96QZ7 1491 aaPredicted RBP49.44■■■■■ 5.5
PNMA2-206ENST00000522764 CHD1O14646 1710 aa49.34■■■■■ 5.49
PNMA2-206ENST00000522764 FBLN2P98095 1184 aa49.22■■■■■ 5.47
PNMA2-206ENST00000522764 SYNJ2O15056 1496 aa49.22■■■■■ 5.47
PNMA2-206ENST00000522764 ERICH3Q5RHP9 1530 aa49.18■■■■■ 5.46
PNMA2-206ENST00000522764 CHMP7Q8WUX9 453 aaPredicted RBP49.14■■■■■ 5.46
PNMA2-206ENST00000522764 ADAMTS12P58397 1594 aa49.07■■■■■ 5.45
PNMA2-206ENST00000522764 KIF27Q86VH2 1401 aa49.07■■■■■ 5.45
PNMA2-206ENST00000522764 FHAD1B1AJZ9 1412 aa48.99■■■■■ 5.43
PNMA2-206ENST00000522764 TRIM41Q8WV44 630 aa48.91■■■■■ 5.42
PNMA2-206ENST00000522764 GRIN2AQ12879 1464 aa48.9■■■■■ 5.42
PNMA2-206ENST00000522764 CLASP1Q7Z460 1538 aa48.82■■■■■ 5.41
PNMA2-206ENST00000522764 IGF1RP08069 1367 aa48.78■■■■■ 5.4
PNMA2-206ENST00000522764 CUL7Q14999 1698 aa48.77■■■■■ 5.4
PNMA2-206ENST00000522764 NUP160Q12769 1436 aa48.68■■■■■ 5.38
PNMA2-206ENST00000522764 ARHGEF11O15085 1522 aa48.68■■■■■ 5.38
PNMA2-206ENST00000522764 RIMBP3CA6NJZ7 1639 aa48.66■■■■■ 5.38
PNMA2-206ENST00000522764 RIMBP3BA6NNM3 1639 aa48.66■■■■■ 5.38
PNMA2-206ENST00000522764 RIMBP3Q9UFD9 1639 aa48.66■■■■■ 5.38
PNMA2-206ENST00000522764 CEP170Q5SW79 1584 aa48.62■■■■■ 5.37
PNMA2-206ENST00000522764 CARMIL1Q5VZK9 1371 aa48.52■■■■■ 5.36
PNMA2-206ENST00000522764 RUSC2Q8N2Y8 1516 aa48.51■■■■■ 5.36
PNMA2-206ENST00000522764 CHIC1Q5VXU3 224 aa48.32■■■■■ 5.33
PNMA2-206ENST00000522764 SHROOM2Q13796 1616 aa48.32■■■■■ 5.33
PNMA2-206ENST00000522764 RAPGEF2Q9Y4G8 1499 aa48.28■■■■■ 5.32
PNMA2-206ENST00000522764 ARAP1Q96P48 1450 aa48.27■■■■■ 5.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms