RNA–Protein interactions for RNA: ENST00000522749.5

CLK4-212, Transcript of CDC like kinase 4, humanhuman

TSL 3

Gene CLK4, Length 572 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-212ENST00000522749 NISCHQ9Y2I1 1504 aa15.68■□□□□ 0.1
CLK4-212ENST00000522749 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
CLK4-212ENST00000522749 ABCC9O60706 1549 aa13.53□□□□□ -0.24
CLK4-212ENST00000522749 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
CLK4-212ENST00000522749 NACADO15069 1562 aa13.1□□□□□ -0.31
CLK4-212ENST00000522749 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
CLK4-212ENST00000522749 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
CLK4-212ENST00000522749 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
CLK4-212ENST00000522749 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
CLK4-212ENST00000522749 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
CLK4-212ENST00000522749 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
CLK4-212ENST00000522749 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
CLK4-212ENST00000522749 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLK4-212ENST00000522749 SHROOM4Q9ULL8 1493 aa12.55□□□□□ -0.4
CLK4-212ENST00000522749 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
CLK4-212ENST00000522749 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.44
CLK4-212ENST00000522749 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
CLK4-212ENST00000522749 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
CLK4-212ENST00000522749 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
CLK4-212ENST00000522749 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
CLK4-212ENST00000522749 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
CLK4-212ENST00000522749 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
CLK4-212ENST00000522749 SMARCA2P51531 1590 aa12.09□□□□□ -0.47
CLK4-212ENST00000522749 WIZO95785 1651 aa12.06□□□□□ -0.48
CLK4-212ENST00000522749 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
CLK4-212ENST00000522749 HMGXB3Q12766 1538 aa12.05□□□□□ -0.48
CLK4-212ENST00000522749 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
CLK4-212ENST00000522749 BAZ1BQ9UIG0 1483 aaKnown RBP11.96□□□□□ -0.49
CLK4-212ENST00000522749 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
CLK4-212ENST00000522749 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
CLK4-212ENST00000522749 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
CLK4-212ENST00000522749 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
CLK4-212ENST00000522749 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
CLK4-212ENST00000522749 NESP48681 1621 aa11.75□□□□□ -0.53
CLK4-212ENST00000522749 CCDC88BA6NC98 1476 aa11.68□□□□□ -0.54
CLK4-212ENST00000522749 THOC2Q8NI27 1593 aaKnown RBP11.66□□□□□ -0.54
CLK4-212ENST00000522749 ERCC6Q03468 1493 aa11.64□□□□□ -0.55
CLK4-212ENST00000522749 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
CLK4-212ENST00000522749 CFTRP13569 1480 aa11.62□□□□□ -0.55
CLK4-212ENST00000522749 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
CLK4-212ENST00000522749 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
CLK4-212ENST00000522749 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
CLK4-212ENST00000522749 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
CLK4-212ENST00000522749 CUX2O14529 1486 aa11.52□□□□□ -0.56
CLK4-212ENST00000522749 WDR62O43379 1518 aa11.52□□□□□ -0.57
CLK4-212ENST00000522749 MRC2Q9UBG0 1479 aa11.51□□□□□ -0.57
CLK4-212ENST00000522749 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
CLK4-212ENST00000522749 DNMBPQ6XZF7 1577 aa11.43□□□□□ -0.58
CLK4-212ENST00000522749 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
CLK4-212ENST00000522749 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
CLK4-212ENST00000522749 CUX1P39880 1505 aa11.36□□□□□ -0.59
CLK4-212ENST00000522749 BIVM-ERCC5R4GMW8 1640 aa11.36□□□□□ -0.59
CLK4-212ENST00000522749 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
CLK4-212ENST00000522749 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
CLK4-212ENST00000522749 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
CLK4-212ENST00000522749 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
CLK4-212ENST00000522749 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
CLK4-212ENST00000522749 POLA1P09884 1462 aaPredicted RBP11.3□□□□□ -0.6
CLK4-212ENST00000522749 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
CLK4-212ENST00000522749 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
CLK4-212ENST00000522749 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
CLK4-212ENST00000522749 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
CLK4-212ENST00000522749 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
CLK4-212ENST00000522749 CHD1O14646 1710 aa11.23□□□□□ -0.61
CLK4-212ENST00000522749 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
CLK4-212ENST00000522749 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
CLK4-212ENST00000522749 SOGA1O94964 1423 aa11.19□□□□□ -0.62
CLK4-212ENST00000522749 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
CLK4-212ENST00000522749 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.621e-8■■■□□ 18.8
CLK4-212ENST00000522749 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
CLK4-212ENST00000522749 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
CLK4-212ENST00000522749 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
CLK4-212ENST00000522749 AEBP2Q6ZN18 517 aaPredicted RBP11.09□□□□□ -0.63
CLK4-212ENST00000522749 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
CLK4-212ENST00000522749 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
CLK4-212ENST00000522749 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
CLK4-212ENST00000522749 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
CLK4-212ENST00000522749 CUL7Q14999 1698 aa11.05□□□□□ -0.64
CLK4-212ENST00000522749 SYNJ2O15056 1496 aa11.02□□□□□ -0.65
CLK4-212ENST00000522749 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
CLK4-212ENST00000522749 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
CLK4-212ENST00000522749 KIF27Q86VH2 1401 aa10.98□□□□□ -0.65
CLK4-212ENST00000522749 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
CLK4-212ENST00000522749 GRIN2AQ12879 1464 aa10.97□□□□□ -0.65
CLK4-212ENST00000522749 RIMBP3CA6NJZ7 1639 aa10.96□□□□□ -0.65
CLK4-212ENST00000522749 RIMBP3BA6NNM3 1639 aa10.96□□□□□ -0.65
CLK4-212ENST00000522749 RIMBP3Q9UFD9 1639 aa10.96□□□□□ -0.65
CLK4-212ENST00000522749 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
CLK4-212ENST00000522749 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
CLK4-212ENST00000522749 FHAD1B1AJZ9 1412 aa10.95□□□□□ -0.66
CLK4-212ENST00000522749 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
CLK4-212ENST00000522749 FBLN2P98095 1184 aa10.93□□□□□ -0.66
CLK4-212ENST00000522749 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
CLK4-212ENST00000522749 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
CLK4-212ENST00000522749 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
CLK4-212ENST00000522749 NUP160Q12769 1436 aa10.91□□□□□ -0.66
CLK4-212ENST00000522749 IGF1RP08069 1367 aa10.9□□□□□ -0.66
CLK4-212ENST00000522749 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
CLK4-212ENST00000522749 CHIC1Q5VXU3 224 aa10.86□□□□□ -0.67
CLK4-212ENST00000522749 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms