RNA–Protein interactions for RNA: ENST00000522743.1

AP003351.1-201, humanhuman

TSL 3 BASIC

Gene AP003351.1, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003351.1-201ENST00000522743 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
AP003351.1-201ENST00000522743 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
AP003351.1-201ENST00000522743 ABCC9O60706 1549 aa29.06■■■□□ 2.24
AP003351.1-201ENST00000522743 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
AP003351.1-201ENST00000522743 NACADO15069 1562 aa27.53■■■□□ 2
AP003351.1-201ENST00000522743 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
AP003351.1-201ENST00000522743 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
AP003351.1-201ENST00000522743 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
AP003351.1-201ENST00000522743 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
AP003351.1-201ENST00000522743 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
AP003351.1-201ENST00000522743 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
AP003351.1-201ENST00000522743 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
AP003351.1-201ENST00000522743 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
AP003351.1-201ENST00000522743 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
AP003351.1-201ENST00000522743 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
AP003351.1-201ENST00000522743 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
AP003351.1-201ENST00000522743 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
AP003351.1-201ENST00000522743 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
AP003351.1-201ENST00000522743 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
AP003351.1-201ENST00000522743 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
AP003351.1-201ENST00000522743 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
AP003351.1-201ENST00000522743 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
AP003351.1-201ENST00000522743 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
AP003351.1-201ENST00000522743 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
AP003351.1-201ENST00000522743 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
AP003351.1-201ENST00000522743 CUX2O14529 1486 aa25.16■■□□□ 1.62
AP003351.1-201ENST00000522743 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
AP003351.1-201ENST00000522743 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
AP003351.1-201ENST00000522743 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
AP003351.1-201ENST00000522743 NESP48681 1621 aa24.89■■□□□ 1.57
AP003351.1-201ENST00000522743 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
AP003351.1-201ENST00000522743 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
AP003351.1-201ENST00000522743 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
AP003351.1-201ENST00000522743 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
AP003351.1-201ENST00000522743 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
AP003351.1-201ENST00000522743 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
AP003351.1-201ENST00000522743 WIZO95785 1651 aa24.56■■□□□ 1.52
AP003351.1-201ENST00000522743 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
AP003351.1-201ENST00000522743 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
AP003351.1-201ENST00000522743 WDR62O43379 1518 aa24.4■■□□□ 1.5
AP003351.1-201ENST00000522743 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
AP003351.1-201ENST00000522743 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
AP003351.1-201ENST00000522743 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
AP003351.1-201ENST00000522743 CFTRP13569 1480 aa24.32■■□□□ 1.48
AP003351.1-201ENST00000522743 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
AP003351.1-201ENST00000522743 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
AP003351.1-201ENST00000522743 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
AP003351.1-201ENST00000522743 CCDC88BA6NC98 1476 aa24.01■■□□□ 1.43
AP003351.1-201ENST00000522743 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
AP003351.1-201ENST00000522743 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
AP003351.1-201ENST00000522743 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
AP003351.1-201ENST00000522743 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
AP003351.1-201ENST00000522743 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
AP003351.1-201ENST00000522743 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
AP003351.1-201ENST00000522743 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
AP003351.1-201ENST00000522743 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
AP003351.1-201ENST00000522743 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
AP003351.1-201ENST00000522743 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
AP003351.1-201ENST00000522743 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
AP003351.1-201ENST00000522743 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.36
AP003351.1-201ENST00000522743 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.36
AP003351.1-201ENST00000522743 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
AP003351.1-201ENST00000522743 FBLN2P98095 1184 aa23.55■■□□□ 1.36
AP003351.1-201ENST00000522743 SOGA1O94964 1423 aa23.53■■□□□ 1.36
AP003351.1-201ENST00000522743 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
AP003351.1-201ENST00000522743 CHD1O14646 1710 aa23.47■■□□□ 1.35
AP003351.1-201ENST00000522743 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
AP003351.1-201ENST00000522743 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
AP003351.1-201ENST00000522743 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
AP003351.1-201ENST00000522743 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
AP003351.1-201ENST00000522743 CUX1P39880 1505 aa23.38■■□□□ 1.33
AP003351.1-201ENST00000522743 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
AP003351.1-201ENST00000522743 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
AP003351.1-201ENST00000522743 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
AP003351.1-201ENST00000522743 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
AP003351.1-201ENST00000522743 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
AP003351.1-201ENST00000522743 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
AP003351.1-201ENST00000522743 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
AP003351.1-201ENST00000522743 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
AP003351.1-201ENST00000522743 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
AP003351.1-201ENST00000522743 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
AP003351.1-201ENST00000522743 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
AP003351.1-201ENST00000522743 ABCA10Q8WWZ4 1543 aa23.21■■□□□ 1.31
AP003351.1-201ENST00000522743 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
AP003351.1-201ENST00000522743 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
AP003351.1-201ENST00000522743 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
AP003351.1-201ENST00000522743 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
AP003351.1-201ENST00000522743 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
AP003351.1-201ENST00000522743 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
AP003351.1-201ENST00000522743 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
AP003351.1-201ENST00000522743 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
AP003351.1-201ENST00000522743 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
AP003351.1-201ENST00000522743 NUP160Q12769 1436 aa22.93■■□□□ 1.26
AP003351.1-201ENST00000522743 CEP170Q5SW79 1584 aa22.87■■□□□ 1.25
AP003351.1-201ENST00000522743 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
AP003351.1-201ENST00000522743 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
AP003351.1-201ENST00000522743 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
AP003351.1-201ENST00000522743 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
AP003351.1-201ENST00000522743 KIF27Q86VH2 1401 aa22.7■■□□□ 1.22
AP003351.1-201ENST00000522743 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms