RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
CTNNA1-235ENST00000522730 ABCC9O60706 1549 aa22.52■■□□□ 1.19
CTNNA1-235ENST00000522730 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
CTNNA1-235ENST00000522730 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
CTNNA1-235ENST00000522730 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
CTNNA1-235ENST00000522730 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
CTNNA1-235ENST00000522730 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
CTNNA1-235ENST00000522730 NACADO15069 1562 aa21.22■□□□□ 0.99
CTNNA1-235ENST00000522730 PABPN1Q86U42 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
CTNNA1-235ENST00000522730 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
CTNNA1-235ENST00000522730 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
CTNNA1-235ENST00000522730 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
CTNNA1-235ENST00000522730 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
CTNNA1-235ENST00000522730 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
CTNNA1-235ENST00000522730 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
CTNNA1-235ENST00000522730 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
CTNNA1-235ENST00000522730 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
CTNNA1-235ENST00000522730 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
CTNNA1-235ENST00000522730 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
CTNNA1-235ENST00000522730 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
CTNNA1-235ENST00000522730 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
CTNNA1-235ENST00000522730 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
CTNNA1-235ENST00000522730 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
CTNNA1-235ENST00000522730 SMARCA2P51531 1590 aa19.52■□□□□ 0.71
CTNNA1-235ENST00000522730 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
CTNNA1-235ENST00000522730 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
CTNNA1-235ENST00000522730 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
CTNNA1-235ENST00000522730 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
CTNNA1-235ENST00000522730 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
CTNNA1-235ENST00000522730 NESP48681 1621 aa19.36■□□□□ 0.69
CTNNA1-235ENST00000522730 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
CTNNA1-235ENST00000522730 CUX2O14529 1486 aa19.23■□□□□ 0.67
CTNNA1-235ENST00000522730 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
CTNNA1-235ENST00000522730 WIZO95785 1651 aa19.18■□□□□ 0.66
CTNNA1-235ENST00000522730 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
CTNNA1-235ENST00000522730 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
CTNNA1-235ENST00000522730 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
CTNNA1-235ENST00000522730 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
CTNNA1-235ENST00000522730 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
CTNNA1-235ENST00000522730 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
CTNNA1-235ENST00000522730 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
CTNNA1-235ENST00000522730 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
CTNNA1-235ENST00000522730 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
CTNNA1-235ENST00000522730 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
CTNNA1-235ENST00000522730 CFTRP13569 1480 aa18.84■□□□□ 0.61
CTNNA1-235ENST00000522730 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
CTNNA1-235ENST00000522730 WDR62O43379 1518 aa18.78■□□□□ 0.6
CTNNA1-235ENST00000522730 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
CTNNA1-235ENST00000522730 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
CTNNA1-235ENST00000522730 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
CTNNA1-235ENST00000522730 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
CTNNA1-235ENST00000522730 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
CTNNA1-235ENST00000522730 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
CTNNA1-235ENST00000522730 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
CTNNA1-235ENST00000522730 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
CTNNA1-235ENST00000522730 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
CTNNA1-235ENST00000522730 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
CTNNA1-235ENST00000522730 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
CTNNA1-235ENST00000522730 FBLN2P98095 1184 aa18.37■□□□□ 0.53
CTNNA1-235ENST00000522730 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTNNA1-235ENST00000522730 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
CTNNA1-235ENST00000522730 SOGA1O94964 1423 aa18.32■□□□□ 0.52
CTNNA1-235ENST00000522730 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
CTNNA1-235ENST00000522730 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
CTNNA1-235ENST00000522730 EIF4G3O43432 1585 aaKnown RBP18.29■□□□□ 0.52
CTNNA1-235ENST00000522730 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
CTNNA1-235ENST00000522730 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
CTNNA1-235ENST00000522730 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
CTNNA1-235ENST00000522730 CUX1P39880 1505 aa18.23■□□□□ 0.51
CTNNA1-235ENST00000522730 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
CTNNA1-235ENST00000522730 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
CTNNA1-235ENST00000522730 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
CTNNA1-235ENST00000522730 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
CTNNA1-235ENST00000522730 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
CTNNA1-235ENST00000522730 CHD1O14646 1710 aa18.13■□□□□ 0.49
CTNNA1-235ENST00000522730 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
CTNNA1-235ENST00000522730 ARHGEF11O15085 1522 aa18.12■□□□□ 0.49
CTNNA1-235ENST00000522730 GRIN2BQ13224 1484 aa18.08■□□□□ 0.49
CTNNA1-235ENST00000522730 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
CTNNA1-235ENST00000522730 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
CTNNA1-235ENST00000522730 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
CTNNA1-235ENST00000522730 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
CTNNA1-235ENST00000522730 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
CTNNA1-235ENST00000522730 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
CTNNA1-235ENST00000522730 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
CTNNA1-235ENST00000522730 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
CTNNA1-235ENST00000522730 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
CTNNA1-235ENST00000522730 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
CTNNA1-235ENST00000522730 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
CTNNA1-235ENST00000522730 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
CTNNA1-235ENST00000522730 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
CTNNA1-235ENST00000522730 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
CTNNA1-235ENST00000522730 GRIN2AQ12879 1464 aa17.83■□□□□ 0.45
CTNNA1-235ENST00000522730 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
CTNNA1-235ENST00000522730 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
CTNNA1-235ENST00000522730 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
CTNNA1-235ENST00000522730 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
CTNNA1-235ENST00000522730 NUP160Q12769 1436 aa17.73■□□□□ 0.43
CTNNA1-235ENST00000522730 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
CTNNA1-235ENST00000522730 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms