RNA–Protein interactions for RNA: ENST00000522518.1

TRMT12-203, Transcript of tRNA methyltransferase 12 homolog, humanhuman

TSL 3

Gene TRMT12, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12-203ENST00000522518 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
TRMT12-203ENST00000522518 NISCHQ9Y2I1 1504 aa18.1■□□□□ 0.49
TRMT12-203ENST00000522518 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
TRMT12-203ENST00000522518 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
TRMT12-203ENST00000522518 ABCC9O60706 1549 aa16.06■□□□□ 0.16
TRMT12-203ENST00000522518 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
TRMT12-203ENST00000522518 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
TRMT12-203ENST00000522518 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
TRMT12-203ENST00000522518 NACADO15069 1562 aa15.32■□□□□ 0.04
TRMT12-203ENST00000522518 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
TRMT12-203ENST00000522518 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
TRMT12-203ENST00000522518 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
TRMT12-203ENST00000522518 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
TRMT12-203ENST00000522518 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
TRMT12-203ENST00000522518 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
TRMT12-203ENST00000522518 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
TRMT12-203ENST00000522518 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRMT12-203ENST00000522518 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
TRMT12-203ENST00000522518 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
TRMT12-203ENST00000522518 FOXD1Q16676 465 aa14.72□□□□□ -0.05
TRMT12-203ENST00000522518 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
TRMT12-203ENST00000522518 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
TRMT12-203ENST00000522518 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
TRMT12-203ENST00000522518 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
TRMT12-203ENST00000522518 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
TRMT12-203ENST00000522518 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
TRMT12-203ENST00000522518 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
TRMT12-203ENST00000522518 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
TRMT12-203ENST00000522518 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
TRMT12-203ENST00000522518 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
TRMT12-203ENST00000522518 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
TRMT12-203ENST00000522518 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
TRMT12-203ENST00000522518 CUX2O14529 1486 aa13.9□□□□□ -0.18
TRMT12-203ENST00000522518 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
TRMT12-203ENST00000522518 NESP48681 1621 aa13.88□□□□□ -0.19
TRMT12-203ENST00000522518 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
TRMT12-203ENST00000522518 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
TRMT12-203ENST00000522518 MSH5O43196 834 aa13.85□□□□□ -0.19
TRMT12-203ENST00000522518 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.19
TRMT12-203ENST00000522518 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
TRMT12-203ENST00000522518 WIZO95785 1651 aa13.8□□□□□ -0.2
TRMT12-203ENST00000522518 ADRA2BP18089 450 aa13.8□□□□□ -0.2
TRMT12-203ENST00000522518 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
TRMT12-203ENST00000522518 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
TRMT12-203ENST00000522518 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
TRMT12-203ENST00000522518 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
TRMT12-203ENST00000522518 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
TRMT12-203ENST00000522518 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
TRMT12-203ENST00000522518 WDR62O43379 1518 aa13.62□□□□□ -0.23
TRMT12-203ENST00000522518 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
TRMT12-203ENST00000522518 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
TRMT12-203ENST00000522518 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
TRMT12-203ENST00000522518 CFTRP13569 1480 aa13.56□□□□□ -0.24
TRMT12-203ENST00000522518 CEP164Q9UPV0 1460 aa13.5□□□□□ -0.25
TRMT12-203ENST00000522518 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
TRMT12-203ENST00000522518 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
TRMT12-203ENST00000522518 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
TRMT12-203ENST00000522518 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
TRMT12-203ENST00000522518 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
TRMT12-203ENST00000522518 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
TRMT12-203ENST00000522518 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
TRMT12-203ENST00000522518 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
TRMT12-203ENST00000522518 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
TRMT12-203ENST00000522518 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
TRMT12-203ENST00000522518 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
TRMT12-203ENST00000522518 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
TRMT12-203ENST00000522518 WDR97A6NE52 1622 aa13.17□□□□□ -0.3
TRMT12-203ENST00000522518 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
TRMT12-203ENST00000522518 CHD1O14646 1710 aa13.16□□□□□ -0.3
TRMT12-203ENST00000522518 RIMBP3CA6NJZ7 1639 aa13.14□□□□□ -0.31
TRMT12-203ENST00000522518 RIMBP3BA6NNM3 1639 aa13.14□□□□□ -0.31
TRMT12-203ENST00000522518 RIMBP3Q9UFD9 1639 aa13.14□□□□□ -0.31
TRMT12-203ENST00000522518 CUX1P39880 1505 aa13.11□□□□□ -0.31
TRMT12-203ENST00000522518 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
TRMT12-203ENST00000522518 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
TRMT12-203ENST00000522518 AQRO60306 1485 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRMT12-203ENST00000522518 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
TRMT12-203ENST00000522518 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
TRMT12-203ENST00000522518 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
TRMT12-203ENST00000522518 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
TRMT12-203ENST00000522518 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
TRMT12-203ENST00000522518 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
TRMT12-203ENST00000522518 SOGA1O94964 1423 aa12.98□□□□□ -0.33
TRMT12-203ENST00000522518 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
TRMT12-203ENST00000522518 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
TRMT12-203ENST00000522518 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
TRMT12-203ENST00000522518 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.34
TRMT12-203ENST00000522518 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
TRMT12-203ENST00000522518 TOP2BQ02880 1626 aa12.94□□□□□ -0.34
TRMT12-203ENST00000522518 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
TRMT12-203ENST00000522518 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
TRMT12-203ENST00000522518 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
TRMT12-203ENST00000522518 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
TRMT12-203ENST00000522518 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
TRMT12-203ENST00000522518 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
TRMT12-203ENST00000522518 SHROOM2Q13796 1616 aa12.83□□□□□ -0.36
TRMT12-203ENST00000522518 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
TRMT12-203ENST00000522518 NUP160Q12769 1436 aa12.79□□□□□ -0.36
TRMT12-203ENST00000522518 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
TRMT12-203ENST00000522518 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms