RNA–Protein interactions for RNA: ENST00000522440.5

MFAP3-211, Transcript of microfibril associated protein 3, humanhuman

TSL 4

Gene MFAP3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFAP3-211ENST00000522440 NISCHQ9Y2I1 1504 aa23.26■■□□□ 1.31
MFAP3-211ENST00000522440 ABCC9O60706 1549 aa21.36■■□□□ 1.01
MFAP3-211ENST00000522440 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
MFAP3-211ENST00000522440 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.9
MFAP3-211ENST00000522440 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
MFAP3-211ENST00000522440 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
MFAP3-211ENST00000522440 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
MFAP3-211ENST00000522440 NACADO15069 1562 aa19.64■□□□□ 0.73
MFAP3-211ENST00000522440 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
MFAP3-211ENST00000522440 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
MFAP3-211ENST00000522440 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
MFAP3-211ENST00000522440 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
MFAP3-211ENST00000522440 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
MFAP3-211ENST00000522440 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
MFAP3-211ENST00000522440 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
MFAP3-211ENST00000522440 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
MFAP3-211ENST00000522440 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
MFAP3-211ENST00000522440 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
MFAP3-211ENST00000522440 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
MFAP3-211ENST00000522440 CUX2O14529 1486 aa18.71■□□□□ 0.59
MFAP3-211ENST00000522440 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
MFAP3-211ENST00000522440 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
MFAP3-211ENST00000522440 NESP48681 1621 aa18.16■□□□□ 0.5
MFAP3-211ENST00000522440 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
MFAP3-211ENST00000522440 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
MFAP3-211ENST00000522440 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
MFAP3-211ENST00000522440 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
MFAP3-211ENST00000522440 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
MFAP3-211ENST00000522440 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
MFAP3-211ENST00000522440 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
MFAP3-211ENST00000522440 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
MFAP3-211ENST00000522440 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
MFAP3-211ENST00000522440 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
MFAP3-211ENST00000522440 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
MFAP3-211ENST00000522440 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
MFAP3-211ENST00000522440 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
MFAP3-211ENST00000522440 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
MFAP3-211ENST00000522440 WIZO95785 1651 aa17.7■□□□□ 0.42
MFAP3-211ENST00000522440 WDR62O43379 1518 aa17.69■□□□□ 0.42
MFAP3-211ENST00000522440 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
MFAP3-211ENST00000522440 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
MFAP3-211ENST00000522440 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
MFAP3-211ENST00000522440 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
MFAP3-211ENST00000522440 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
MFAP3-211ENST00000522440 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
MFAP3-211ENST00000522440 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
MFAP3-211ENST00000522440 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
MFAP3-211ENST00000522440 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
MFAP3-211ENST00000522440 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
MFAP3-211ENST00000522440 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
MFAP3-211ENST00000522440 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
MFAP3-211ENST00000522440 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
MFAP3-211ENST00000522440 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
MFAP3-211ENST00000522440 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
MFAP3-211ENST00000522440 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
MFAP3-211ENST00000522440 CFTRP13569 1480 aa17.27■□□□□ 0.36
MFAP3-211ENST00000522440 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
MFAP3-211ENST00000522440 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
MFAP3-211ENST00000522440 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
MFAP3-211ENST00000522440 CHD1O14646 1710 aa17.14■□□□□ 0.33
MFAP3-211ENST00000522440 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
MFAP3-211ENST00000522440 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
MFAP3-211ENST00000522440 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
MFAP3-211ENST00000522440 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
MFAP3-211ENST00000522440 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.3
MFAP3-211ENST00000522440 FBLN2P98095 1184 aa16.91■□□□□ 0.3
MFAP3-211ENST00000522440 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
MFAP3-211ENST00000522440 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
MFAP3-211ENST00000522440 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
MFAP3-211ENST00000522440 ILDR1Q86SU0 546 aaPredicted RBP16.87■□□□□ 0.29
MFAP3-211ENST00000522440 CUX1P39880 1505 aa16.78■□□□□ 0.28
MFAP3-211ENST00000522440 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
MFAP3-211ENST00000522440 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
MFAP3-211ENST00000522440 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
MFAP3-211ENST00000522440 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
MFAP3-211ENST00000522440 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
MFAP3-211ENST00000522440 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
MFAP3-211ENST00000522440 SOGA1O94964 1423 aa16.7■□□□□ 0.26
MFAP3-211ENST00000522440 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
MFAP3-211ENST00000522440 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
MFAP3-211ENST00000522440 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
MFAP3-211ENST00000522440 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
MFAP3-211ENST00000522440 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
MFAP3-211ENST00000522440 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
MFAP3-211ENST00000522440 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
MFAP3-211ENST00000522440 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
MFAP3-211ENST00000522440 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
MFAP3-211ENST00000522440 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
MFAP3-211ENST00000522440 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
MFAP3-211ENST00000522440 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
MFAP3-211ENST00000522440 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
MFAP3-211ENST00000522440 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
MFAP3-211ENST00000522440 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
MFAP3-211ENST00000522440 CEP170Q5SW79 1584 aa16.46■□□□□ 0.23
MFAP3-211ENST00000522440 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
MFAP3-211ENST00000522440 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
MFAP3-211ENST00000522440 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
MFAP3-211ENST00000522440 KDM6BO15054 1643 aa16.39■□□□□ 0.21
MFAP3-211ENST00000522440 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
MFAP3-211ENST00000522440 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms