RNA–Protein interactions for RNA: ENST00000522192.5

EBF1-208, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 1,911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-208ENST00000522192 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
EBF1-208ENST00000522192 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
EBF1-208ENST00000522192 ABCC9O60706 1549 aa27.58■■■□□ 2.01
EBF1-208ENST00000522192 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
EBF1-208ENST00000522192 NACADO15069 1562 aa26.35■■□□□ 1.81
EBF1-208ENST00000522192 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
EBF1-208ENST00000522192 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
EBF1-208ENST00000522192 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
EBF1-208ENST00000522192 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
EBF1-208ENST00000522192 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
EBF1-208ENST00000522192 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
EBF1-208ENST00000522192 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
EBF1-208ENST00000522192 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
EBF1-208ENST00000522192 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
EBF1-208ENST00000522192 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
EBF1-208ENST00000522192 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
EBF1-208ENST00000522192 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
EBF1-208ENST00000522192 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
EBF1-208ENST00000522192 HRCP23327 699 aa24.73■■□□□ 1.55
EBF1-208ENST00000522192 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
EBF1-208ENST00000522192 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
EBF1-208ENST00000522192 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
EBF1-208ENST00000522192 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
EBF1-208ENST00000522192 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
EBF1-208ENST00000522192 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
EBF1-208ENST00000522192 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
EBF1-208ENST00000522192 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
EBF1-208ENST00000522192 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
EBF1-208ENST00000522192 PEG3Q9GZU2 1588 aa24.17■■□□□ 1.46
EBF1-208ENST00000522192 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
EBF1-208ENST00000522192 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
EBF1-208ENST00000522192 WIZO95785 1651 aa23.98■■□□□ 1.43
EBF1-208ENST00000522192 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
EBF1-208ENST00000522192 NESP48681 1621 aa23.83■■□□□ 1.4
EBF1-208ENST00000522192 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
EBF1-208ENST00000522192 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
EBF1-208ENST00000522192 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
EBF1-208ENST00000522192 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
EBF1-208ENST00000522192 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
EBF1-208ENST00000522192 PPARGC1BQ86YN6 1023 aaKnown RBP23.69■■□□□ 1.38
EBF1-208ENST00000522192 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
EBF1-208ENST00000522192 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
EBF1-208ENST00000522192 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
EBF1-208ENST00000522192 CUX2O14529 1486 aa23.55■■□□□ 1.36
EBF1-208ENST00000522192 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
EBF1-208ENST00000522192 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
EBF1-208ENST00000522192 CFTRP13569 1480 aa23.43■■□□□ 1.34
EBF1-208ENST00000522192 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
EBF1-208ENST00000522192 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
EBF1-208ENST00000522192 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
EBF1-208ENST00000522192 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
EBF1-208ENST00000522192 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
EBF1-208ENST00000522192 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
EBF1-208ENST00000522192 WDR62O43379 1518 aa23.26■■□□□ 1.31
EBF1-208ENST00000522192 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
EBF1-208ENST00000522192 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
EBF1-208ENST00000522192 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
EBF1-208ENST00000522192 MYT1Q01538 1121 aa22.98■■□□□ 1.27
EBF1-208ENST00000522192 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
EBF1-208ENST00000522192 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
EBF1-208ENST00000522192 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
EBF1-208ENST00000522192 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
EBF1-208ENST00000522192 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
EBF1-208ENST00000522192 ZNF608Q9ULD9 1512 aaPredicted RBP22.78■■□□□ 1.24
EBF1-208ENST00000522192 POLA1P09884 1462 aaPredicted RBP22.76■■□□□ 1.23
EBF1-208ENST00000522192 CUX1P39880 1505 aa22.74■■□□□ 1.23
EBF1-208ENST00000522192 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
EBF1-208ENST00000522192 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
EBF1-208ENST00000522192 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
EBF1-208ENST00000522192 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
EBF1-208ENST00000522192 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
EBF1-208ENST00000522192 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
EBF1-208ENST00000522192 SOGA1O94964 1423 aa22.64■■□□□ 1.21
EBF1-208ENST00000522192 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
EBF1-208ENST00000522192 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
EBF1-208ENST00000522192 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
EBF1-208ENST00000522192 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
EBF1-208ENST00000522192 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
EBF1-208ENST00000522192 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
EBF1-208ENST00000522192 CCER1Q8TC90 406 aaPredicted RBP22.53■■□□□ 1.2
EBF1-208ENST00000522192 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
EBF1-208ENST00000522192 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
EBF1-208ENST00000522192 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
EBF1-208ENST00000522192 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
EBF1-208ENST00000522192 CHD1O14646 1710 aa22.46■■□□□ 1.19
EBF1-208ENST00000522192 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
EBF1-208ENST00000522192 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
EBF1-208ENST00000522192 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
EBF1-208ENST00000522192 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
EBF1-208ENST00000522192 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
EBF1-208ENST00000522192 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
EBF1-208ENST00000522192 FBLN2P98095 1184 aa22.39■■□□□ 1.17
EBF1-208ENST00000522192 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
EBF1-208ENST00000522192 EEA1Q15075 1411 aa22.38■■□□□ 1.17
EBF1-208ENST00000522192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.37■■□□□ 1.17
EBF1-208ENST00000522192 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
EBF1-208ENST00000522192 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.17
EBF1-208ENST00000522192 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
EBF1-208ENST00000522192 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
EBF1-208ENST00000522192 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms