RNA–Protein interactions for RNA: ENST00000522065.5

RUNX1T1-239, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-239ENST00000522065 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
RUNX1T1-239ENST00000522065 ABCC9O60706 1549 aa19.18■□□□□ 0.66
RUNX1T1-239ENST00000522065 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
RUNX1T1-239ENST00000522065 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
RUNX1T1-239ENST00000522065 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
RUNX1T1-239ENST00000522065 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
RUNX1T1-239ENST00000522065 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
RUNX1T1-239ENST00000522065 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
RUNX1T1-239ENST00000522065 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
RUNX1T1-239ENST00000522065 NACADO15069 1562 aa17.62■□□□□ 0.41
RUNX1T1-239ENST00000522065 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
RUNX1T1-239ENST00000522065 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
RUNX1T1-239ENST00000522065 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
RUNX1T1-239ENST00000522065 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
RUNX1T1-239ENST00000522065 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
RUNX1T1-239ENST00000522065 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
RUNX1T1-239ENST00000522065 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
RUNX1T1-239ENST00000522065 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
RUNX1T1-239ENST00000522065 CUX2O14529 1486 aa16.94■□□□□ 0.3
RUNX1T1-239ENST00000522065 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
RUNX1T1-239ENST00000522065 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
RUNX1T1-239ENST00000522065 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
RUNX1T1-239ENST00000522065 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
RUNX1T1-239ENST00000522065 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
RUNX1T1-239ENST00000522065 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
RUNX1T1-239ENST00000522065 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
RUNX1T1-239ENST00000522065 NESP48681 1621 aa16.24■□□□□ 0.19
RUNX1T1-239ENST00000522065 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
RUNX1T1-239ENST00000522065 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
RUNX1T1-239ENST00000522065 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
RUNX1T1-239ENST00000522065 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
RUNX1T1-239ENST00000522065 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
RUNX1T1-239ENST00000522065 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
RUNX1T1-239ENST00000522065 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
RUNX1T1-239ENST00000522065 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
RUNX1T1-239ENST00000522065 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
RUNX1T1-239ENST00000522065 WDR62O43379 1518 aa15.89■□□□□ 0.13
RUNX1T1-239ENST00000522065 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
RUNX1T1-239ENST00000522065 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
RUNX1T1-239ENST00000522065 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
RUNX1T1-239ENST00000522065 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
RUNX1T1-239ENST00000522065 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
RUNX1T1-239ENST00000522065 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
RUNX1T1-239ENST00000522065 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
RUNX1T1-239ENST00000522065 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
RUNX1T1-239ENST00000522065 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
RUNX1T1-239ENST00000522065 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
RUNX1T1-239ENST00000522065 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
RUNX1T1-239ENST00000522065 CYB5RLQ6IPT4 315 aa15.64■□□□□ 0.09
RUNX1T1-239ENST00000522065 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
RUNX1T1-239ENST00000522065 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
RUNX1T1-239ENST00000522065 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
RUNX1T1-239ENST00000522065 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
RUNX1T1-239ENST00000522065 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
RUNX1T1-239ENST00000522065 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
RUNX1T1-239ENST00000522065 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
RUNX1T1-239ENST00000522065 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
RUNX1T1-239ENST00000522065 CFTRP13569 1480 aa15.39■□□□□ 0.05
RUNX1T1-239ENST00000522065 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
RUNX1T1-239ENST00000522065 CHD1O14646 1710 aa15.29■□□□□ 0.04
RUNX1T1-239ENST00000522065 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
RUNX1T1-239ENST00000522065 WIZO95785 1651 aa15.19■□□□□ 0.02
RUNX1T1-239ENST00000522065 FBLN2P98095 1184 aa15.16■□□□□ 0.02
RUNX1T1-239ENST00000522065 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
RUNX1T1-239ENST00000522065 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
RUNX1T1-239ENST00000522065 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
RUNX1T1-239ENST00000522065 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
RUNX1T1-239ENST00000522065 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
RUNX1T1-239ENST00000522065 ABCC8Q09428 1581 aa15.07■□□□□ 0
RUNX1T1-239ENST00000522065 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
RUNX1T1-239ENST00000522065 SYNJ1O43426 1573 aa15.04■□□□□ -0
RUNX1T1-239ENST00000522065 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
RUNX1T1-239ENST00000522065 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
RUNX1T1-239ENST00000522065 KDM4FA0A1W2PPD8 638 aa14.99□□□□□ -0.01
RUNX1T1-239ENST00000522065 FOXD1Q16676 465 aa14.99□□□□□ -0.01
RUNX1T1-239ENST00000522065 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
RUNX1T1-239ENST00000522065 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
RUNX1T1-239ENST00000522065 POLA1P09884 1462 aaPredicted RBP14.95□□□□□ -0.02
RUNX1T1-239ENST00000522065 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
RUNX1T1-239ENST00000522065 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
RUNX1T1-239ENST00000522065 KIF13AQ9H1H9 1805 aa14.91□□□□□ -0.02
RUNX1T1-239ENST00000522065 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
RUNX1T1-239ENST00000522065 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
RUNX1T1-239ENST00000522065 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
RUNX1T1-239ENST00000522065 SOGA1O94964 1423 aa14.83□□□□□ -0.03
RUNX1T1-239ENST00000522065 GRIN2BQ13224 1484 aa14.83□□□□□ -0.03
RUNX1T1-239ENST00000522065 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
RUNX1T1-239ENST00000522065 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
RUNX1T1-239ENST00000522065 ABCC10Q5T3U5 1492 aa14.76□□□□□ -0.05
RUNX1T1-239ENST00000522065 KDM6BO15054 1643 aa14.75□□□□□ -0.05
RUNX1T1-239ENST00000522065 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
RUNX1T1-239ENST00000522065 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
RUNX1T1-239ENST00000522065 FAM69CQ0P6D2 419 aa14.73□□□□□ -0.05
RUNX1T1-239ENST00000522065 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
RUNX1T1-239ENST00000522065 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
RUNX1T1-239ENST00000522065 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
RUNX1T1-239ENST00000522065 ADGRL1O94910 1474 aa14.67□□□□□ -0.06
RUNX1T1-239ENST00000522065 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
RUNX1T1-239ENST00000522065 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
RUNX1T1-239ENST00000522065 PBRM1Q86U86 1689 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms