RNA–Protein interactions for RNA: ENST00000521878.1

PSD3-217, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 5

Gene PSD3, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-217ENST00000521878 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
PSD3-217ENST00000521878 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
PSD3-217ENST00000521878 ABCC9O60706 1549 aa20.57■□□□□ 0.88
PSD3-217ENST00000521878 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
PSD3-217ENST00000521878 NACADO15069 1562 aa19.78■□□□□ 0.76
PSD3-217ENST00000521878 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
PSD3-217ENST00000521878 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PSD3-217ENST00000521878 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
PSD3-217ENST00000521878 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
PSD3-217ENST00000521878 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
PSD3-217ENST00000521878 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
PSD3-217ENST00000521878 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
PSD3-217ENST00000521878 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
PSD3-217ENST00000521878 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
PSD3-217ENST00000521878 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
PSD3-217ENST00000521878 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
PSD3-217ENST00000521878 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
PSD3-217ENST00000521878 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
PSD3-217ENST00000521878 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
PSD3-217ENST00000521878 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
PSD3-217ENST00000521878 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
PSD3-217ENST00000521878 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
PSD3-217ENST00000521878 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
PSD3-217ENST00000521878 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
PSD3-217ENST00000521878 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
PSD3-217ENST00000521878 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
PSD3-217ENST00000521878 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
PSD3-217ENST00000521878 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
PSD3-217ENST00000521878 WIZO95785 1651 aa17.88■□□□□ 0.45
PSD3-217ENST00000521878 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
PSD3-217ENST00000521878 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
PSD3-217ENST00000521878 NESP48681 1621 aa17.77■□□□□ 0.44
PSD3-217ENST00000521878 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
PSD3-217ENST00000521878 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
PSD3-217ENST00000521878 CUX2O14529 1486 aa17.69■□□□□ 0.42
PSD3-217ENST00000521878 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
PSD3-217ENST00000521878 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
PSD3-217ENST00000521878 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
PSD3-217ENST00000521878 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
PSD3-217ENST00000521878 CFTRP13569 1480 aa17.57■□□□□ 0.4
PSD3-217ENST00000521878 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
PSD3-217ENST00000521878 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
PSD3-217ENST00000521878 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
PSD3-217ENST00000521878 WDR62O43379 1518 aa17.45■□□□□ 0.38
PSD3-217ENST00000521878 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
PSD3-217ENST00000521878 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
PSD3-217ENST00000521878 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
PSD3-217ENST00000521878 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
PSD3-217ENST00000521878 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
PSD3-217ENST00000521878 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
PSD3-217ENST00000521878 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
PSD3-217ENST00000521878 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
PSD3-217ENST00000521878 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
PSD3-217ENST00000521878 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
PSD3-217ENST00000521878 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
PSD3-217ENST00000521878 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
PSD3-217ENST00000521878 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
PSD3-217ENST00000521878 CUX1P39880 1505 aa16.98■□□□□ 0.31
PSD3-217ENST00000521878 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
PSD3-217ENST00000521878 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
PSD3-217ENST00000521878 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
PSD3-217ENST00000521878 SOGA1O94964 1423 aa16.92■□□□□ 0.3
PSD3-217ENST00000521878 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
PSD3-217ENST00000521878 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
PSD3-217ENST00000521878 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
PSD3-217ENST00000521878 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
PSD3-217ENST00000521878 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
PSD3-217ENST00000521878 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
PSD3-217ENST00000521878 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
PSD3-217ENST00000521878 TDRD9Q8NDG6 1382 aaKnown RBP16.81■□□□□ 0.28
PSD3-217ENST00000521878 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
PSD3-217ENST00000521878 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
PSD3-217ENST00000521878 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
PSD3-217ENST00000521878 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
PSD3-217ENST00000521878 CHD1O14646 1710 aa16.76■□□□□ 0.27
PSD3-217ENST00000521878 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
PSD3-217ENST00000521878 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
PSD3-217ENST00000521878 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
PSD3-217ENST00000521878 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
PSD3-217ENST00000521878 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
PSD3-217ENST00000521878 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
PSD3-217ENST00000521878 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
PSD3-217ENST00000521878 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
PSD3-217ENST00000521878 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
PSD3-217ENST00000521878 FBLN2P98095 1184 aa16.62■□□□□ 0.25
PSD3-217ENST00000521878 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
PSD3-217ENST00000521878 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
PSD3-217ENST00000521878 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
PSD3-217ENST00000521878 FHAD1B1AJZ9 1412 aa16.55■□□□□ 0.24
PSD3-217ENST00000521878 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
PSD3-217ENST00000521878 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
PSD3-217ENST00000521878 NUP160Q12769 1436 aa16.51■□□□□ 0.23
PSD3-217ENST00000521878 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
PSD3-217ENST00000521878 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
PSD3-217ENST00000521878 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
PSD3-217ENST00000521878 IGF1RP08069 1367 aa16.44■□□□□ 0.22
PSD3-217ENST00000521878 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
PSD3-217ENST00000521878 CUL7Q14999 1698 aa16.42■□□□□ 0.22
PSD3-217ENST00000521878 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
PSD3-217ENST00000521878 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms