RNA–Protein interactions for RNA: ENST00000521817.1

GEM-203, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

TSL 2

Gene GEM, Length 740 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-203ENST00000521817 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
GEM-203ENST00000521817 ABCC9O60706 1549 aa24.43■■□□□ 1.5
GEM-203ENST00000521817 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
GEM-203ENST00000521817 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
GEM-203ENST00000521817 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
GEM-203ENST00000521817 NACADO15069 1562 aa23.1■■□□□ 1.29
GEM-203ENST00000521817 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
GEM-203ENST00000521817 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
GEM-203ENST00000521817 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
GEM-203ENST00000521817 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
GEM-203ENST00000521817 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
GEM-203ENST00000521817 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
GEM-203ENST00000521817 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
GEM-203ENST00000521817 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
GEM-203ENST00000521817 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
GEM-203ENST00000521817 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
GEM-203ENST00000521817 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
GEM-203ENST00000521817 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
GEM-203ENST00000521817 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
GEM-203ENST00000521817 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
GEM-203ENST00000521817 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
GEM-203ENST00000521817 BAZ1AQ9NRL2 1556 aaPredicted RBP21.28■■□□□ 1
GEM-203ENST00000521817 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
GEM-203ENST00000521817 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
GEM-203ENST00000521817 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
GEM-203ENST00000521817 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
GEM-203ENST00000521817 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
GEM-203ENST00000521817 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
GEM-203ENST00000521817 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
GEM-203ENST00000521817 CUX2O14529 1486 aa21.07■□□□□ 0.96
GEM-203ENST00000521817 WIZO95785 1651 aa21.07■□□□□ 0.96
GEM-203ENST00000521817 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
GEM-203ENST00000521817 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
GEM-203ENST00000521817 NESP48681 1621 aa20.97■□□□□ 0.95
GEM-203ENST00000521817 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
GEM-203ENST00000521817 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
GEM-203ENST00000521817 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
GEM-203ENST00000521817 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
GEM-203ENST00000521817 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
GEM-203ENST00000521817 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
GEM-203ENST00000521817 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
GEM-203ENST00000521817 KIF21AQ7Z4S6 1674 aa20.69■□□□□ 0.9
GEM-203ENST00000521817 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
GEM-203ENST00000521817 WDR62O43379 1518 aa20.48■□□□□ 0.87
GEM-203ENST00000521817 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
GEM-203ENST00000521817 CFTRP13569 1480 aa20.44■□□□□ 0.86
GEM-203ENST00000521817 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
GEM-203ENST00000521817 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
GEM-203ENST00000521817 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
GEM-203ENST00000521817 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
GEM-203ENST00000521817 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
GEM-203ENST00000521817 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
GEM-203ENST00000521817 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
GEM-203ENST00000521817 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
GEM-203ENST00000521817 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
GEM-203ENST00000521817 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
GEM-203ENST00000521817 SYNJ1O43426 1573 aa20■□□□□ 0.79
GEM-203ENST00000521817 DNMBPQ6XZF7 1577 aa19.96■□□□□ 0.79
GEM-203ENST00000521817 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
GEM-203ENST00000521817 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
GEM-203ENST00000521817 EEA1Q15075 1411 aa19.92■□□□□ 0.78
GEM-203ENST00000521817 LOC105371045A0A1W2PR82 267 aa19.91■□□□□ 0.78
GEM-203ENST00000521817 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
GEM-203ENST00000521817 CUX1P39880 1505 aa19.89■□□□□ 0.77
GEM-203ENST00000521817 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
GEM-203ENST00000521817 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
GEM-203ENST00000521817 SOGA1O94964 1423 aa19.85■□□□□ 0.77
GEM-203ENST00000521817 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
GEM-203ENST00000521817 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
GEM-203ENST00000521817 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
GEM-203ENST00000521817 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
GEM-203ENST00000521817 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
GEM-203ENST00000521817 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
GEM-203ENST00000521817 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
GEM-203ENST00000521817 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
GEM-203ENST00000521817 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
GEM-203ENST00000521817 FBLN2P98095 1184 aa19.74■□□□□ 0.75
GEM-203ENST00000521817 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
GEM-203ENST00000521817 CHD1O14646 1710 aa19.73■□□□□ 0.75
GEM-203ENST00000521817 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
GEM-203ENST00000521817 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
GEM-203ENST00000521817 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
GEM-203ENST00000521817 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
GEM-203ENST00000521817 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
GEM-203ENST00000521817 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
GEM-203ENST00000521817 KIF21BO75037 1637 aa19.6■□□□□ 0.73
GEM-203ENST00000521817 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
GEM-203ENST00000521817 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
GEM-203ENST00000521817 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
GEM-203ENST00000521817 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
GEM-203ENST00000521817 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
GEM-203ENST00000521817 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
GEM-203ENST00000521817 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
GEM-203ENST00000521817 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
GEM-203ENST00000521817 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
GEM-203ENST00000521817 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.72
GEM-203ENST00000521817 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
GEM-203ENST00000521817 IGF1RP08069 1367 aa19.49■□□□□ 0.71
GEM-203ENST00000521817 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
GEM-203ENST00000521817 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms