RNA–Protein interactions for RNA: ENST00000521733.5

RUNX1T1-235, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-235ENST00000521733 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
RUNX1T1-235ENST00000521733 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
RUNX1T1-235ENST00000521733 ABCC9O60706 1549 aa20.77■□□□□ 0.92
RUNX1T1-235ENST00000521733 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
RUNX1T1-235ENST00000521733 NACADO15069 1562 aa19.73■□□□□ 0.75
RUNX1T1-235ENST00000521733 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
RUNX1T1-235ENST00000521733 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
RUNX1T1-235ENST00000521733 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
RUNX1T1-235ENST00000521733 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
RUNX1T1-235ENST00000521733 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
RUNX1T1-235ENST00000521733 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
RUNX1T1-235ENST00000521733 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
RUNX1T1-235ENST00000521733 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
RUNX1T1-235ENST00000521733 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
RUNX1T1-235ENST00000521733 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
RUNX1T1-235ENST00000521733 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
RUNX1T1-235ENST00000521733 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
RUNX1T1-235ENST00000521733 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
RUNX1T1-235ENST00000521733 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
RUNX1T1-235ENST00000521733 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
RUNX1T1-235ENST00000521733 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
RUNX1T1-235ENST00000521733 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
RUNX1T1-235ENST00000521733 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
RUNX1T1-235ENST00000521733 CUX2O14529 1486 aa18.05■□□□□ 0.48
RUNX1T1-235ENST00000521733 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
RUNX1T1-235ENST00000521733 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
RUNX1T1-235ENST00000521733 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
RUNX1T1-235ENST00000521733 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
RUNX1T1-235ENST00000521733 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
RUNX1T1-235ENST00000521733 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
RUNX1T1-235ENST00000521733 NESP48681 1621 aa17.79■□□□□ 0.44
RUNX1T1-235ENST00000521733 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
RUNX1T1-235ENST00000521733 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
RUNX1T1-235ENST00000521733 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
RUNX1T1-235ENST00000521733 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
RUNX1T1-235ENST00000521733 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
RUNX1T1-235ENST00000521733 WIZO95785 1651 aa17.52■□□□□ 0.4
RUNX1T1-235ENST00000521733 MRC2Q9UBG0 1479 aa17.52■□□□□ 0.4
RUNX1T1-235ENST00000521733 WDR62O43379 1518 aa17.46■□□□□ 0.39
RUNX1T1-235ENST00000521733 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
RUNX1T1-235ENST00000521733 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
RUNX1T1-235ENST00000521733 CFTRP13569 1480 aa17.43■□□□□ 0.38
RUNX1T1-235ENST00000521733 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
RUNX1T1-235ENST00000521733 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
RUNX1T1-235ENST00000521733 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
RUNX1T1-235ENST00000521733 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
RUNX1T1-235ENST00000521733 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
RUNX1T1-235ENST00000521733 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
RUNX1T1-235ENST00000521733 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
RUNX1T1-235ENST00000521733 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
RUNX1T1-235ENST00000521733 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
RUNX1T1-235ENST00000521733 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
RUNX1T1-235ENST00000521733 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
RUNX1T1-235ENST00000521733 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
RUNX1T1-235ENST00000521733 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
RUNX1T1-235ENST00000521733 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
RUNX1T1-235ENST00000521733 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
RUNX1T1-235ENST00000521733 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
RUNX1T1-235ENST00000521733 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
RUNX1T1-235ENST00000521733 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
RUNX1T1-235ENST00000521733 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
RUNX1T1-235ENST00000521733 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
RUNX1T1-235ENST00000521733 SOGA1O94964 1423 aa16.85■□□□□ 0.29
RUNX1T1-235ENST00000521733 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
RUNX1T1-235ENST00000521733 FBLN2P98095 1184 aa16.8■□□□□ 0.28
RUNX1T1-235ENST00000521733 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
RUNX1T1-235ENST00000521733 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
RUNX1T1-235ENST00000521733 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
RUNX1T1-235ENST00000521733 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
RUNX1T1-235ENST00000521733 CHD1O14646 1710 aa16.74■□□□□ 0.27
RUNX1T1-235ENST00000521733 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
RUNX1T1-235ENST00000521733 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
RUNX1T1-235ENST00000521733 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
RUNX1T1-235ENST00000521733 CUX1P39880 1505 aa16.7■□□□□ 0.26
RUNX1T1-235ENST00000521733 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
RUNX1T1-235ENST00000521733 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
RUNX1T1-235ENST00000521733 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
RUNX1T1-235ENST00000521733 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
RUNX1T1-235ENST00000521733 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
RUNX1T1-235ENST00000521733 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
RUNX1T1-235ENST00000521733 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
RUNX1T1-235ENST00000521733 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
RUNX1T1-235ENST00000521733 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
RUNX1T1-235ENST00000521733 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
RUNX1T1-235ENST00000521733 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RUNX1T1-235ENST00000521733 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
RUNX1T1-235ENST00000521733 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
RUNX1T1-235ENST00000521733 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
RUNX1T1-235ENST00000521733 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
RUNX1T1-235ENST00000521733 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RUNX1T1-235ENST00000521733 NUP160Q12769 1436 aa16.43■□□□□ 0.22
RUNX1T1-235ENST00000521733 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
RUNX1T1-235ENST00000521733 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
RUNX1T1-235ENST00000521733 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
RUNX1T1-235ENST00000521733 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
RUNX1T1-235ENST00000521733 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
RUNX1T1-235ENST00000521733 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
RUNX1T1-235ENST00000521733 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
RUNX1T1-235ENST00000521733 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
RUNX1T1-235ENST00000521733 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms