RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
SPARC-203ENST00000521327 ABCC9O60706 1549 aa31.06■■■□□ 2.56
SPARC-203ENST00000521327 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SPARC-203ENST00000521327 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
SPARC-203ENST00000521327 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
SPARC-203ENST00000521327 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
SPARC-203ENST00000521327 NACADO15069 1562 aa29.09■■■□□ 2.25
SPARC-203ENST00000521327 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
SPARC-203ENST00000521327 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
SPARC-203ENST00000521327 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
SPARC-203ENST00000521327 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SPARC-203ENST00000521327 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
SPARC-203ENST00000521327 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.1
SPARC-203ENST00000521327 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
SPARC-203ENST00000521327 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
SPARC-203ENST00000521327 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
SPARC-203ENST00000521327 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
SPARC-203ENST00000521327 EIF4G1Q04637 1599 aaKnown RBP27.84■■■□□ 2.05
SPARC-203ENST00000521327 DNAJC5Q9H3Z4 198 aa27.21■■□□□ 1.95
SPARC-203ENST00000521327 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
SPARC-203ENST00000521327 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
SPARC-203ENST00000521327 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
SPARC-203ENST00000521327 CUX2O14529 1486 aa26.81■■□□□ 1.88
SPARC-203ENST00000521327 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
SPARC-203ENST00000521327 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
SPARC-203ENST00000521327 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SPARC-203ENST00000521327 NESP48681 1621 aa26.6■■□□□ 1.85
SPARC-203ENST00000521327 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
SPARC-203ENST00000521327 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
SPARC-203ENST00000521327 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
SPARC-203ENST00000521327 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
SPARC-203ENST00000521327 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
SPARC-203ENST00000521327 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
SPARC-203ENST00000521327 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
SPARC-203ENST00000521327 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
SPARC-203ENST00000521327 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
SPARC-203ENST00000521327 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
SPARC-203ENST00000521327 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
SPARC-203ENST00000521327 WIZO95785 1651 aa25.93■■□□□ 1.74
SPARC-203ENST00000521327 WDR62O43379 1518 aa25.88■■□□□ 1.73
SPARC-203ENST00000521327 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
SPARC-203ENST00000521327 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
SPARC-203ENST00000521327 CFTRP13569 1480 aa25.75■■□□□ 1.71
SPARC-203ENST00000521327 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
SPARC-203ENST00000521327 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
SPARC-203ENST00000521327 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
SPARC-203ENST00000521327 URB2Q14146 1524 aaKnown RBP25.59■■□□□ 1.69
SPARC-203ENST00000521327 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
SPARC-203ENST00000521327 ZNF608Q9ULD9 1512 aaPredicted RBP25.35■■□□□ 1.65
SPARC-203ENST00000521327 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
SPARC-203ENST00000521327 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
SPARC-203ENST00000521327 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
SPARC-203ENST00000521327 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
SPARC-203ENST00000521327 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
SPARC-203ENST00000521327 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
SPARC-203ENST00000521327 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
SPARC-203ENST00000521327 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
SPARC-203ENST00000521327 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
SPARC-203ENST00000521327 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
SPARC-203ENST00000521327 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SPARC-203ENST00000521327 FBLN2P98095 1184 aa25.1■■□□□ 1.61
SPARC-203ENST00000521327 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
SPARC-203ENST00000521327 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
SPARC-203ENST00000521327 TARBP1Q13395 1621 aaKnown RBP25■■□□□ 1.59
SPARC-203ENST00000521327 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
SPARC-203ENST00000521327 TDRD9Q8NDG6 1382 aaKnown RBP24.96■■□□□ 1.59
SPARC-203ENST00000521327 SOGA1O94964 1423 aa24.95■■□□□ 1.58
SPARC-203ENST00000521327 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SPARC-203ENST00000521327 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
SPARC-203ENST00000521327 CHD1O14646 1710 aa24.89■■□□□ 1.57
SPARC-203ENST00000521327 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
SPARC-203ENST00000521327 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
SPARC-203ENST00000521327 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
SPARC-203ENST00000521327 CUX1P39880 1505 aa24.74■■□□□ 1.55
SPARC-203ENST00000521327 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
SPARC-203ENST00000521327 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.55
SPARC-203ENST00000521327 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
SPARC-203ENST00000521327 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
SPARC-203ENST00000521327 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
SPARC-203ENST00000521327 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
SPARC-203ENST00000521327 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
SPARC-203ENST00000521327 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
SPARC-203ENST00000521327 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
SPARC-203ENST00000521327 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
SPARC-203ENST00000521327 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
SPARC-203ENST00000521327 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
SPARC-203ENST00000521327 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
SPARC-203ENST00000521327 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
SPARC-203ENST00000521327 ERCC6L2Q5T890 1561 aa24.32■■□□□ 1.48
SPARC-203ENST00000521327 NUP160Q12769 1436 aa24.31■■□□□ 1.48
SPARC-203ENST00000521327 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
SPARC-203ENST00000521327 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
SPARC-203ENST00000521327 CEP170Q5SW79 1584 aa24.26■■□□□ 1.47
SPARC-203ENST00000521327 TOP2BQ02880 1626 aa24.22■■□□□ 1.47
SPARC-203ENST00000521327 JPH4Q96JJ6 628 aa24.17■■□□□ 1.46
SPARC-203ENST00000521327 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
SPARC-203ENST00000521327 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
SPARC-203ENST00000521327 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
SPARC-203ENST00000521327 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
SPARC-203ENST00000521327 NPM1P06748 294 aaKnown RBP eCLIP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms