RNA–Protein interactions for RNA: ENST00000521087.5

CDH15-202, Transcript of cadherin 15, humanhuman

TSL 5

Gene CDH15, Length 1,246 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-202ENST00000521087 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
CDH15-202ENST00000521087 ABCC9O60706 1549 aa27.37■■□□□ 1.97
CDH15-202ENST00000521087 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
CDH15-202ENST00000521087 DNAJC5BQ9UF47 199 aa26.17■■□□□ 1.78
CDH15-202ENST00000521087 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
CDH15-202ENST00000521087 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
CDH15-202ENST00000521087 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
CDH15-202ENST00000521087 NACADO15069 1562 aa25.19■■□□□ 1.62
CDH15-202ENST00000521087 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
CDH15-202ENST00000521087 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
CDH15-202ENST00000521087 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
CDH15-202ENST00000521087 MYO15BQ96JP2 1530 aa24.62■■□□□ 1.53
CDH15-202ENST00000521087 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
CDH15-202ENST00000521087 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
CDH15-202ENST00000521087 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
CDH15-202ENST00000521087 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
CDH15-202ENST00000521087 DNAJC5Q9H3Z4 198 aa24.32■■□□□ 1.48
CDH15-202ENST00000521087 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
CDH15-202ENST00000521087 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
CDH15-202ENST00000521087 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
CDH15-202ENST00000521087 CUX2O14529 1486 aa23.57■■□□□ 1.36
CDH15-202ENST00000521087 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
CDH15-202ENST00000521087 NESP48681 1621 aa23.33■■□□□ 1.33
CDH15-202ENST00000521087 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
CDH15-202ENST00000521087 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
CDH15-202ENST00000521087 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
CDH15-202ENST00000521087 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
CDH15-202ENST00000521087 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
CDH15-202ENST00000521087 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
CDH15-202ENST00000521087 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
CDH15-202ENST00000521087 KIF21AQ7Z4S6 1674 aa22.94■■□□□ 1.26
CDH15-202ENST00000521087 BAZ1AQ9NRL2 1556 aaPredicted RBP22.94■■□□□ 1.26
CDH15-202ENST00000521087 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
CDH15-202ENST00000521087 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
CDH15-202ENST00000521087 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
CDH15-202ENST00000521087 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
CDH15-202ENST00000521087 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
CDH15-202ENST00000521087 MRC2Q9UBG0 1479 aa22.67■■□□□ 1.22
CDH15-202ENST00000521087 WIZO95785 1651 aa22.64■■□□□ 1.21
CDH15-202ENST00000521087 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
CDH15-202ENST00000521087 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
CDH15-202ENST00000521087 WDR62O43379 1518 aa22.56■■□□□ 1.2
CDH15-202ENST00000521087 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
CDH15-202ENST00000521087 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
CDH15-202ENST00000521087 FANCD2Q9BXW9 1451 aa22.44■■□□□ 1.18
CDH15-202ENST00000521087 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
CDH15-202ENST00000521087 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
CDH15-202ENST00000521087 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
CDH15-202ENST00000521087 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
CDH15-202ENST00000521087 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
CDH15-202ENST00000521087 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
CDH15-202ENST00000521087 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
CDH15-202ENST00000521087 CFTRP13569 1480 aa22.19■■□□□ 1.14
CDH15-202ENST00000521087 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
CDH15-202ENST00000521087 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
CDH15-202ENST00000521087 CCDC88BA6NC98 1476 aa22.13■■□□□ 1.13
CDH15-202ENST00000521087 FBLN2P98095 1184 aa22.1■■□□□ 1.13
CDH15-202ENST00000521087 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CDH15-202ENST00000521087 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
CDH15-202ENST00000521087 CHD1O14646 1710 aa21.93■■□□□ 1.1
CDH15-202ENST00000521087 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
CDH15-202ENST00000521087 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
CDH15-202ENST00000521087 TOPBP1Q92547 1522 aa21.92■■□□□ 1.1
CDH15-202ENST00000521087 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.1
CDH15-202ENST00000521087 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
CDH15-202ENST00000521087 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
CDH15-202ENST00000521087 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
CDH15-202ENST00000521087 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
CDH15-202ENST00000521087 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
CDH15-202ENST00000521087 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
CDH15-202ENST00000521087 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
CDH15-202ENST00000521087 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
CDH15-202ENST00000521087 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.05
CDH15-202ENST00000521087 SOGA1O94964 1423 aa21.62■■□□□ 1.05
CDH15-202ENST00000521087 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
CDH15-202ENST00000521087 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
CDH15-202ENST00000521087 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
CDH15-202ENST00000521087 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
CDH15-202ENST00000521087 CUX1P39880 1505 aa21.44■■□□□ 1.02
CDH15-202ENST00000521087 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
CDH15-202ENST00000521087 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
CDH15-202ENST00000521087 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
CDH15-202ENST00000521087 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
CDH15-202ENST00000521087 PBRM1Q86U86 1689 aa21.33■■□□□ 1
CDH15-202ENST00000521087 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
CDH15-202ENST00000521087 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
CDH15-202ENST00000521087 TOP2BQ02880 1626 aa21.29■■□□□ 1
CDH15-202ENST00000521087 WDR97A6NE52 1622 aa21.27■■□□□ 1
CDH15-202ENST00000521087 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
CDH15-202ENST00000521087 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
CDH15-202ENST00000521087 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
CDH15-202ENST00000521087 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
CDH15-202ENST00000521087 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
CDH15-202ENST00000521087 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
CDH15-202ENST00000521087 KIF13AQ9H1H9 1805 aa21.1■□□□□ 0.97
CDH15-202ENST00000521087 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
CDH15-202ENST00000521087 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
CDH15-202ENST00000521087 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
CDH15-202ENST00000521087 ILDR1Q86SU0 546 aaPredicted RBP21.03■□□□□ 0.96
CDH15-202ENST00000521087 NUP160Q12769 1436 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms