RNA–Protein interactions for RNA: ENST00000521024.1

TOP1MT-212, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-212ENST00000521024 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
TOP1MT-212ENST00000521024 ABCC9O60706 1549 aa20.19■□□□□ 0.82
TOP1MT-212ENST00000521024 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
TOP1MT-212ENST00000521024 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
TOP1MT-212ENST00000521024 NACADO15069 1562 aa19.07■□□□□ 0.64
TOP1MT-212ENST00000521024 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
TOP1MT-212ENST00000521024 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
TOP1MT-212ENST00000521024 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
TOP1MT-212ENST00000521024 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
TOP1MT-212ENST00000521024 UNC13AQ9UPW8 1703 aa18.73■□□□□ 0.59
TOP1MT-212ENST00000521024 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
TOP1MT-212ENST00000521024 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
TOP1MT-212ENST00000521024 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
TOP1MT-212ENST00000521024 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
TOP1MT-212ENST00000521024 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
TOP1MT-212ENST00000521024 CECR2Q9BXF3 1484 aa18.25■□□□□ 0.51
TOP1MT-212ENST00000521024 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
TOP1MT-212ENST00000521024 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
TOP1MT-212ENST00000521024 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
TOP1MT-212ENST00000521024 CUX2O14529 1486 aa17.56■□□□□ 0.4
TOP1MT-212ENST00000521024 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
TOP1MT-212ENST00000521024 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
TOP1MT-212ENST00000521024 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
TOP1MT-212ENST00000521024 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
TOP1MT-212ENST00000521024 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
TOP1MT-212ENST00000521024 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
TOP1MT-212ENST00000521024 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
TOP1MT-212ENST00000521024 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
TOP1MT-212ENST00000521024 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
TOP1MT-212ENST00000521024 NESP48681 1621 aa17.25■□□□□ 0.35
TOP1MT-212ENST00000521024 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
TOP1MT-212ENST00000521024 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
TOP1MT-212ENST00000521024 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
TOP1MT-212ENST00000521024 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
TOP1MT-212ENST00000521024 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
TOP1MT-212ENST00000521024 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
TOP1MT-212ENST00000521024 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
TOP1MT-212ENST00000521024 WDR62O43379 1518 aa16.91■□□□□ 0.3
TOP1MT-212ENST00000521024 WIZO95785 1651 aa16.91■□□□□ 0.3
TOP1MT-212ENST00000521024 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
TOP1MT-212ENST00000521024 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
TOP1MT-212ENST00000521024 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
TOP1MT-212ENST00000521024 CFTRP13569 1480 aa16.78■□□□□ 0.28
TOP1MT-212ENST00000521024 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
TOP1MT-212ENST00000521024 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
TOP1MT-212ENST00000521024 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
TOP1MT-212ENST00000521024 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
TOP1MT-212ENST00000521024 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
TOP1MT-212ENST00000521024 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
TOP1MT-212ENST00000521024 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
TOP1MT-212ENST00000521024 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
TOP1MT-212ENST00000521024 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
TOP1MT-212ENST00000521024 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
TOP1MT-212ENST00000521024 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
TOP1MT-212ENST00000521024 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
TOP1MT-212ENST00000521024 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
TOP1MT-212ENST00000521024 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
TOP1MT-212ENST00000521024 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
TOP1MT-212ENST00000521024 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
TOP1MT-212ENST00000521024 CHD1O14646 1710 aa16.33■□□□□ 0.2
TOP1MT-212ENST00000521024 FBLN2P98095 1184 aa16.32■□□□□ 0.2
TOP1MT-212ENST00000521024 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
TOP1MT-212ENST00000521024 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
TOP1MT-212ENST00000521024 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
TOP1MT-212ENST00000521024 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-212ENST00000521024 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
TOP1MT-212ENST00000521024 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
TOP1MT-212ENST00000521024 SOGA1O94964 1423 aa16.25■□□□□ 0.19
TOP1MT-212ENST00000521024 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
TOP1MT-212ENST00000521024 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
TOP1MT-212ENST00000521024 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
TOP1MT-212ENST00000521024 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
TOP1MT-212ENST00000521024 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
TOP1MT-212ENST00000521024 MAGI1Q96QZ7 1491 aaPredicted RBP16.17■□□□□ 0.18
TOP1MT-212ENST00000521024 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
TOP1MT-212ENST00000521024 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
TOP1MT-212ENST00000521024 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
TOP1MT-212ENST00000521024 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
TOP1MT-212ENST00000521024 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
TOP1MT-212ENST00000521024 CUX1P39880 1505 aa16.09■□□□□ 0.17
TOP1MT-212ENST00000521024 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
TOP1MT-212ENST00000521024 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
TOP1MT-212ENST00000521024 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
TOP1MT-212ENST00000521024 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
TOP1MT-212ENST00000521024 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
TOP1MT-212ENST00000521024 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
TOP1MT-212ENST00000521024 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
TOP1MT-212ENST00000521024 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
TOP1MT-212ENST00000521024 ADAMTS12P58397 1594 aa15.85■□□□□ 0.13
TOP1MT-212ENST00000521024 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
TOP1MT-212ENST00000521024 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
TOP1MT-212ENST00000521024 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
TOP1MT-212ENST00000521024 NUP160Q12769 1436 aa15.84■□□□□ 0.13
TOP1MT-212ENST00000521024 CEP170Q5SW79 1584 aa15.83■□□□□ 0.12
TOP1MT-212ENST00000521024 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
TOP1MT-212ENST00000521024 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
TOP1MT-212ENST00000521024 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
TOP1MT-212ENST00000521024 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
TOP1MT-212ENST00000521024 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
TOP1MT-212ENST00000521024 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms