RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
CDH17-204ENST00000520952 ABCC9O60706 1549 aa20.69■□□□□ 0.9
CDH17-204ENST00000520952 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
CDH17-204ENST00000520952 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
CDH17-204ENST00000520952 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
CDH17-204ENST00000520952 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
CDH17-204ENST00000520952 NACADO15069 1562 aa19.41■□□□□ 0.7
CDH17-204ENST00000520952 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
CDH17-204ENST00000520952 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
CDH17-204ENST00000520952 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
CDH17-204ENST00000520952 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
CDH17-204ENST00000520952 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
CDH17-204ENST00000520952 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
CDH17-204ENST00000520952 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
CDH17-204ENST00000520952 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
CDH17-204ENST00000520952 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
CDH17-204ENST00000520952 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
CDH17-204ENST00000520952 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
CDH17-204ENST00000520952 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
CDH17-204ENST00000520952 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
CDH17-204ENST00000520952 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
CDH17-204ENST00000520952 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
CDH17-204ENST00000520952 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
CDH17-204ENST00000520952 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
CDH17-204ENST00000520952 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
CDH17-204ENST00000520952 NESP48681 1621 aa17.77■□□□□ 0.44
CDH17-204ENST00000520952 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
CDH17-204ENST00000520952 CUX2O14529 1486 aa17.75■□□□□ 0.43
CDH17-204ENST00000520952 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
CDH17-204ENST00000520952 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
CDH17-204ENST00000520952 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
CDH17-204ENST00000520952 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
CDH17-204ENST00000520952 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
CDH17-204ENST00000520952 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
CDH17-204ENST00000520952 WIZO95785 1651 aa17.47■□□□□ 0.39
CDH17-204ENST00000520952 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
CDH17-204ENST00000520952 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
CDH17-204ENST00000520952 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
CDH17-204ENST00000520952 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
CDH17-204ENST00000520952 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
CDH17-204ENST00000520952 WDR62O43379 1518 aa17.25■□□□□ 0.35
CDH17-204ENST00000520952 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
CDH17-204ENST00000520952 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
CDH17-204ENST00000520952 CFTRP13569 1480 aa17.21■□□□□ 0.35
CDH17-204ENST00000520952 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
CDH17-204ENST00000520952 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
CDH17-204ENST00000520952 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
CDH17-204ENST00000520952 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
CDH17-204ENST00000520952 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
CDH17-204ENST00000520952 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
CDH17-204ENST00000520952 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
CDH17-204ENST00000520952 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
CDH17-204ENST00000520952 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
CDH17-204ENST00000520952 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
CDH17-204ENST00000520952 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
CDH17-204ENST00000520952 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
CDH17-204ENST00000520952 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDH17-204ENST00000520952 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
CDH17-204ENST00000520952 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
CDH17-204ENST00000520952 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
CDH17-204ENST00000520952 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.27
CDH17-204ENST00000520952 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
CDH17-204ENST00000520952 FBLN2P98095 1184 aa16.73■□□□□ 0.27
CDH17-204ENST00000520952 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
CDH17-204ENST00000520952 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
CDH17-204ENST00000520952 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
CDH17-204ENST00000520952 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
CDH17-204ENST00000520952 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
CDH17-204ENST00000520952 SOGA1O94964 1423 aa16.69■□□□□ 0.26
CDH17-204ENST00000520952 CHD1O14646 1710 aa16.66■□□□□ 0.26
CDH17-204ENST00000520952 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
CDH17-204ENST00000520952 CUX1P39880 1505 aa16.61■□□□□ 0.25
CDH17-204ENST00000520952 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
CDH17-204ENST00000520952 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
CDH17-204ENST00000520952 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
CDH17-204ENST00000520952 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
CDH17-204ENST00000520952 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CDH17-204ENST00000520952 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
CDH17-204ENST00000520952 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
CDH17-204ENST00000520952 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
CDH17-204ENST00000520952 WDR97A6NE52 1622 aa16.46■□□□□ 0.23
CDH17-204ENST00000520952 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
CDH17-204ENST00000520952 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
CDH17-204ENST00000520952 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
CDH17-204ENST00000520952 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
CDH17-204ENST00000520952 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
CDH17-204ENST00000520952 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
CDH17-204ENST00000520952 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
CDH17-204ENST00000520952 ERCC6L2Q5T890 1561 aa16.29■□□□□ 0.2
CDH17-204ENST00000520952 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
CDH17-204ENST00000520952 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
CDH17-204ENST00000520952 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.19
CDH17-204ENST00000520952 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
CDH17-204ENST00000520952 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
CDH17-204ENST00000520952 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
CDH17-204ENST00000520952 NUP160Q12769 1436 aa16.23■□□□□ 0.19
CDH17-204ENST00000520952 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
CDH17-204ENST00000520952 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
CDH17-204ENST00000520952 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
CDH17-204ENST00000520952 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms