RNA–Protein interactions for RNA: ENST00000520802.5

EFCAB13-209, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-209ENST00000520802 NISCHQ9Y2I1 1504 aa44.01■■■■■ 4.64
EFCAB13-209ENST00000520802 ABCC9O60706 1549 aa39.81■■■■□ 3.96
EFCAB13-209ENST00000520802 CCDC180Q9P1Z9 1646 aa39.53■■■■□ 3.92
EFCAB13-209ENST00000520802 RB1CC1Q8TDY2 1594 aa37.78■■■■□ 3.64
EFCAB13-209ENST00000520802 NACADO15069 1562 aa37.46■■■■□ 3.59
EFCAB13-209ENST00000520802 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
EFCAB13-209ENST00000520802 DNAJC5BQ9UF47 199 aa37.43■■■■□ 3.58
EFCAB13-209ENST00000520802 PABPN1Q86U42 306 aaKnown RBP eCLIP37.08■■■■□ 3.53
EFCAB13-209ENST00000520802 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
EFCAB13-209ENST00000520802 UNC13AQ9UPW8 1703 aa36.82■■■■□ 3.48
EFCAB13-209ENST00000520802 BICRAQ9NZM4 1560 aa36.59■■■■□ 3.45
EFCAB13-209ENST00000520802 ZCCHC6Q5VYS8 1495 aaKnown RBP36.42■■■■□ 3.42
EFCAB13-209ENST00000520802 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
EFCAB13-209ENST00000520802 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
EFCAB13-209ENST00000520802 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
EFCAB13-209ENST00000520802 CC2D2AQ9P2K1 1620 aa35.89■■■■□ 3.34
EFCAB13-209ENST00000520802 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
EFCAB13-209ENST00000520802 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.32
EFCAB13-209ENST00000520802 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
EFCAB13-209ENST00000520802 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
EFCAB13-209ENST00000520802 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
EFCAB13-209ENST00000520802 ERCC6Q03468 1493 aa34.44■■■■□ 3.1
EFCAB13-209ENST00000520802 SMARCA2P51531 1590 aa34.37■■■■□ 3.09
EFCAB13-209ENST00000520802 SMARCA4P51532 1647 aa34.36■■■■□ 3.09
EFCAB13-209ENST00000520802 CUX2O14529 1486 aa34.34■■■■□ 3.09
EFCAB13-209ENST00000520802 HMGXB3Q12766 1538 aa34.29■■■■□ 3.08
EFCAB13-209ENST00000520802 BAZ1AQ9NRL2 1556 aaPredicted RBP34.2■■■■□ 3.07
EFCAB13-209ENST00000520802 BAZ1BQ9UIG0 1483 aaKnown RBP34.17■■■■□ 3.06
EFCAB13-209ENST00000520802 NESP48681 1621 aa34.1■■■■□ 3.05
EFCAB13-209ENST00000520802 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
EFCAB13-209ENST00000520802 MROH2BQ7Z745 1585 aa33.91■■■■□ 3.02
EFCAB13-209ENST00000520802 LAMC3Q9Y6N6 1575 aa33.84■■■■□ 3.01
EFCAB13-209ENST00000520802 THOC2Q8NI27 1593 aaKnown RBP33.73■■■□□ 2.99
EFCAB13-209ENST00000520802 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
EFCAB13-209ENST00000520802 KIF21AQ7Z4S6 1674 aa33.62■■■□□ 2.97
EFCAB13-209ENST00000520802 CADPSQ9ULU8 1353 aa33.57■■■□□ 2.96
EFCAB13-209ENST00000520802 WIZO95785 1651 aa33.5■■■□□ 2.95
EFCAB13-209ENST00000520802 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.94
EFCAB13-209ENST00000520802 WDR62O43379 1518 aa33.27■■■□□ 2.92
EFCAB13-209ENST00000520802 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
EFCAB13-209ENST00000520802 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
EFCAB13-209ENST00000520802 RSF1Q96T23 1441 aaPredicted RBP33.17■■■□□ 2.9
EFCAB13-209ENST00000520802 CFTRP13569 1480 aa33.11■■■□□ 2.89
EFCAB13-209ENST00000520802 TRIM41Q8WV44 630 aa33.08■■■□□ 2.89
EFCAB13-209ENST00000520802 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.88
EFCAB13-209ENST00000520802 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
EFCAB13-209ENST00000520802 OSCARQ8IYS5 282 aa32.85■■■□□ 2.85
EFCAB13-209ENST00000520802 CCDC88BA6NC98 1476 aa32.72■■■□□ 2.83
EFCAB13-209ENST00000520802 PRDM2Q13029 1718 aa32.71■■■□□ 2.83
EFCAB13-209ENST00000520802 IFT140Q96RY7 1462 aa32.58■■■□□ 2.81
EFCAB13-209ENST00000520802 TOPBP1Q92547 1522 aa32.51■■■□□ 2.8
EFCAB13-209ENST00000520802 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.8
EFCAB13-209ENST00000520802 ABCC8Q09428 1581 aa32.48■■■□□ 2.79
EFCAB13-209ENST00000520802 DNMBPQ6XZF7 1577 aa32.37■■■□□ 2.77
EFCAB13-209ENST00000520802 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
EFCAB13-209ENST00000520802 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
EFCAB13-209ENST00000520802 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
EFCAB13-209ENST00000520802 EIF4G3O43432 1585 aaKnown RBP32.31■■■□□ 2.76
EFCAB13-209ENST00000520802 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
EFCAB13-209ENST00000520802 ARHGEF11O15085 1522 aa32.21■■■□□ 2.75
EFCAB13-209ENST00000520802 FBLN2P98095 1184 aa32.2■■■□□ 2.75
EFCAB13-209ENST00000520802 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
EFCAB13-209ENST00000520802 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
EFCAB13-209ENST00000520802 CYB5RLQ6IPT4 315 aa32.11■■■□□ 2.73
EFCAB13-209ENST00000520802 CHD1O14646 1710 aa32.09■■■□□ 2.73
EFCAB13-209ENST00000520802 SOGA1O94964 1423 aa32.08■■■□□ 2.73
EFCAB13-209ENST00000520802 RAD54L2Q9Y4B4 1467 aa32.07■■■□□ 2.72
EFCAB13-209ENST00000520802 TDRD9Q8NDG6 1382 aaKnown RBP32.04■■■□□ 2.72
EFCAB13-209ENST00000520802 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
EFCAB13-209ENST00000520802 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
EFCAB13-209ENST00000520802 SNAPC4Q5SXM2 1469 aa31.9■■■□□ 2.7
EFCAB13-209ENST00000520802 ARAP1Q96P48 1450 aa31.88■■■□□ 2.69
EFCAB13-209ENST00000520802 WDR97A6NE52 1622 aa31.87■■■□□ 2.69
EFCAB13-209ENST00000520802 CUX1P39880 1505 aa31.87■■■□□ 2.69
EFCAB13-209ENST00000520802 TRHP20396 242 aaPredicted RBP31.87■■■□□ 2.69
EFCAB13-209ENST00000520802 GRIN2BQ13224 1484 aa31.79■■■□□ 2.68
EFCAB13-209ENST00000520802 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
EFCAB13-209ENST00000520802 SYNJ1O43426 1573 aa31.75■■■□□ 2.67
EFCAB13-209ENST00000520802 SUPT5HO00267 1087 aaKnown RBP31.74■■■□□ 2.67
EFCAB13-209ENST00000520802 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
EFCAB13-209ENST00000520802 CLASP1Q7Z460 1538 aa31.7■■■□□ 2.67
EFCAB13-209ENST00000520802 GAPVD1Q14C86 1478 aa31.66■■■□□ 2.66
EFCAB13-209ENST00000520802 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
EFCAB13-209ENST00000520802 ABCA10Q8WWZ4 1543 aa31.56■■■□□ 2.64
EFCAB13-209ENST00000520802 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
EFCAB13-209ENST00000520802 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
EFCAB13-209ENST00000520802 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
EFCAB13-209ENST00000520802 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
EFCAB13-209ENST00000520802 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
EFCAB13-209ENST00000520802 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
EFCAB13-209ENST00000520802 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
EFCAB13-209ENST00000520802 NUP160Q12769 1436 aa31.24■■■□□ 2.59
EFCAB13-209ENST00000520802 CEP170Q5SW79 1584 aa31.22■■■□□ 2.59
EFCAB13-209ENST00000520802 ERCC6L2Q5T890 1561 aa31.21■■■□□ 2.59
EFCAB13-209ENST00000520802 ERICH3Q5RHP9 1530 aa31.18■■■□□ 2.58
EFCAB13-209ENST00000520802 AEBP2Q6ZN18 517 aaPredicted RBP31.1■■■□□ 2.57
EFCAB13-209ENST00000520802 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
EFCAB13-209ENST00000520802 PRG4Q92954 1404 aaPredicted RBP31.03■■■□□ 2.56
EFCAB13-209ENST00000520802 JPH4Q96JJ6 628 aa31.02■■■□□ 2.56
EFCAB13-209ENST00000520802 NPM1P06748 294 aaKnown RBP eCLIP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms